RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 FAM122AQ96E09 287 aa4.43□□□□□ -1.7
SMC5-203ENST00000475540 ZBTB18Q99592 522 aa4.43□□□□□ -1.7
SMC5-203ENST00000475540 NCOR1P1Q9H4R4 102 aa4.43□□□□□ -1.7
SMC5-203ENST00000475540 PLSCR3Q9NRY6 295 aa4.43□□□□□ -1.7
SMC5-203ENST00000475540 PTBP2Q9UKA9 531 aaKnown RBP4.43□□□□□ -1.7
SMC5-203ENST00000475540 CAB39Q9Y376 341 aaPredicted RBP4.43□□□□□ -1.7
SMC5-203ENST00000475540 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.43□□□□□ -1.7
SMC5-203ENST00000475540 ABCC4O15439 1325 aa4.43□□□□□ -1.7
SMC5-203ENST00000475540 TMEM89A2RUT3 159 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 TMEM110-MUSTN1A8MSY1 372 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 LANCL1O43813 399 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 LRP3O75074 770 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 SLC2A10O95528 541 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 ASNSP08243 561 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 H2AFZP0C0S5 128 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 CLUP10909 449 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 DRD5P21918 477 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 IGFBP5P24593 272 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 HTR2AP28223 471 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 STX17P56962 302 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 MYBPC1Q00872 1141 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 BEX3Q00994 111 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 ZMYND11Q15326 602 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 CMPK2Q5EBM0 449 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 LRRC8BQ6P9F7 803 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 ZYG11AQ6WRX3 759 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 TAS2R42Q7RTR8 314 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 TSEN54Q7Z6J9 526 aaKnown RBP4.42□□□□□ -1.7
SMC5-203ENST00000475540 CDH26Q8IXH8 852 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 TMEM37Q8WXS4 190 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 NCLNQ969V3 563 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 KIR2DL4Q99706 377 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 CBWD1Q9BRT8 395 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 HPS4Q9NQG7 708 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 YAE1D1Q9NRH1 226 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 C6orf203Q9P0P8 240 aaPredicted RBP4.42□□□□□ -1.7
SMC5-203ENST00000475540 TMED5Q9Y3A6 229 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 KIF16BQ96L93 1317 aa4.42□□□□□ -1.7
SMC5-203ENST00000475540 NSD2O96028 1365 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 XKRY2A2RUG3 117 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 ZFP92A6NM28 416 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 H0Y8G0 127 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 LGALS8O00214 317 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 CASQ2O14958 399 aaPredicted RBP4.41□□□□□ -1.7
SMC5-203ENST00000475540 SYNGR4O95473 234 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 KRT6AP02538 564 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 RPA2P15927 270 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 ATP6V1C1P21283 382 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 DPP4P27487 766 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 ADRA1AP35348 466 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 OR1D4P47884 311 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 ALDH3B2P48448 385 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 CCL11P51671 97 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 RAG2P55895 527 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 CUL2Q13617 745 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 DDX39BQ13838 428 aaKnown RBP4.41□□□□□ -1.7
SMC5-203ENST00000475540 PDK4Q16654 411 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 PAGE2BQ5JRK9 111 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 NCR3LG1Q68D85 454 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 RANBP3LQ86VV4 465 aaPredicted RBP4.41□□□□□ -1.7
SMC5-203ENST00000475540 OR2L5Q8NG80 312 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 FNDC8Q8TC99 324 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 GIPC3Q8TF64 312 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 RLN3Q8WXF3 142 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 CFAP53Q96M91 514 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 APOOQ9BUR5 198 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 HCAR1Q9BXC0 346 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 VCX2Q9H322 139 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 WDR76Q9H967 626 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 MIEF1Q9NQG6 463 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 RBM28Q9NW13 759 aaKnown RBP4.41□□□□□ -1.7
SMC5-203ENST00000475540 ZNF175Q9Y473 711 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 RAD54L2Q9Y4B4 1467 aa4.41□□□□□ -1.7
SMC5-203ENST00000475540 IGLV8-61A0A075B6I0 122 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 K7EQM0 130 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 PDLIM1O00151 329 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 SLC17A2O00624 439 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 XPO1O14980 1071 aaKnown RBP4.4□□□□□ -1.71
SMC5-203ENST00000475540 KIAA0754O94854 1291 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 ELK1P19419 428 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 PAICSP22234 425 aaKnown RBP4.4□□□□□ -1.71
SMC5-203ENST00000475540 IL2RGP31785 369 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 SLC6A8P48029 635 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 NPY2RP49146 381 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 HLCSP50747 726 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 IMMTQ16891 758 aaKnown RBP4.4□□□□□ -1.71
SMC5-203ENST00000475540 ADPRMQ3LIE5 342 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 PRR5LQ6MZQ0 368 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 ZNF544Q6NX49 715 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 YRDCQ86U90 279 aaKnown RBP4.4□□□□□ -1.71
SMC5-203ENST00000475540 GCNT2Q8N0V5 402 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 CADM2Q8N3J6 435 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 MLKLQ8NB16 471 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 COLGALT1Q8NBJ5 622 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 OR2T3Q8NH03 318 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 ZNF564Q8TBZ8 553 aaPredicted RBP4.4□□□□□ -1.71
SMC5-203ENST00000475540 PINX1Q96BK5 328 aaKnown RBP4.4□□□□□ -1.71
SMC5-203ENST00000475540 ZNF607Q96SK3 696 aa4.4□□□□□ -1.71
SMC5-203ENST00000475540 OPN3Q9H1Y3 402 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms