RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CASP6P55212 293 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 MRPS22P82650 360 aaKnown RBP14.34□□□□□ -0.11
CPSF3-203ENST00000475482 HSF1Q00613 529 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 FOXO1Q12778 655 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 HYAL4Q2M3T9 481 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 ZNF750Q32MQ0 723 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 ZCCHC12Q6PEW1 402 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 MRGPRGQ86SM5 289 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 DOLPP1Q86YN1 238 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 CLEC4FQ8N1N0 589 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 OR2L13Q8N349 312 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 OR2M7Q8NG81 312 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 MIPOL1Q8TD10 442 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 RIT1Q92963 219 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 RNF145Q96MT1 663 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 YY1AP1Q9H869 796 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 ZDHHC11Q9H8X9 412 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 CXorf21Q9HAI6 301 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 STOML1Q9UBI4 398 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 SAMD4AQ9UPU9 718 aaKnown RBP14.34□□□□□ -0.11
CPSF3-203ENST00000475482 MEMO1Q9Y316 297 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 AP4S1Q9Y587 144 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 EXPH5Q8NEV8 1989 aa14.34□□□□□ -0.11
CPSF3-203ENST00000475482 PHF3Q92576 2039 aaKnown RBP14.34□□□□□ -0.11
CPSF3-203ENST00000475482 FREM3P0C091 2139 aa14.33□□□□□ -0.11
CPSF3-203ENST00000475482 A0A0G2JMM0 328 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 A0A1W2PPB8 328 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 A0A1W2PRS3 328 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 A0A1W2PS29 197 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 OR6C76A6NM76 312 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 KIR3DP1A8MWS1 328 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 H0Y3Z8 333 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 TFECO14948 347 aaPredicted RBP14.33□□□□□ -0.12
CPSF3-203ENST00000475482 ZNHIT1O43257 154 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 NCK1P16333 377 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 RFC3P40938 356 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 FUT7Q11130 342 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 MAP4K2Q12851 820 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 EBPQ15125 230 aaKnown RBP14.33□□□□□ -0.12
CPSF3-203ENST00000475482 ZNF628Q5EBL2 1059 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 COX20Q5RI15 118 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 ATAD3BQ5T9A4 648 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 XKRXQ6PP77 449 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 PTOV1Q86YD1 416 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 GALNT12Q8IXK2 581 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 ZNF441Q8N8Z8 693 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 PHF10Q8WUB8 498 aaKnown RBP14.33□□□□□ -0.12
CPSF3-203ENST00000475482 PYDC1Q8WXC3 89 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 KAT2AQ92830 837 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 DMRTA2Q96SC8 542 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 ACTRT3Q9BYD9 372 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 A4GALTQ9NPC4 353 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 EXD2Q9NVH0 621 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 GPATCH2Q9NW75 528 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 GMPR2Q9P2T1 348 aaKnown RBP14.33□□□□□ -0.12
CPSF3-203ENST00000475482 P2RX2Q9UBL9 471 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 SH3BGRL2Q9UJC5 107 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 C19orf53Q9UNZ5 99 aaPredicted RBP14.33□□□□□ -0.12
CPSF3-203ENST00000475482 ERVK-19Q9WJR5 959 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 PCDHGB3Q9Y5G1 929 aa14.33□□□□□ -0.12
CPSF3-203ENST00000475482 CREBBPQ92793 2442 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 A0A1B0GTH9 108 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 E9PLN8 166 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 UPK1AO00322 258 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 HNRNPRO43390 633 aaKnown RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 PDE9AO76083 593 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 BAG2O95816 211 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 HMGN2P05204 90 aaKnown RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 ARAFP10398 606 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 FCGR1AP12314 374 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 ABOP16442 354 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 S1PR1P21453 382 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 KDELR2P33947 212 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 NR0B1P51843 470 aaKnown RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 CDK6Q00534 326 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 DUSP2Q05923 314 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 SLC34A1Q06495 639 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 SCARB2Q14108 478 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 ZNF267Q14586 743 aaPredicted RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 LTB4RQ15722 352 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 ADRM1Q16186 407 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 PRICKLE4Q2TBC4 344 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 FAM98BQ52LJ0 330 aaKnown RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 SP5Q6BEB4 398 aaPredicted RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 REEP3Q6NUK4 255 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 PATL1Q86TB9 770 aaKnown RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 DND1Q8IYX4 353 aaKnown RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 VWA5B2Q8N398 1253 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 ZNF615Q8N8J6 731 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 ADCY4Q8NFM4 1077 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 SLC22A8Q8TCC7 542 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 DOK4Q8TEW6 326 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 PAQR8Q8TEZ7 354 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 SPACA9Q96E40 222 aaPredicted RBP14.32□□□□□ -0.12
CPSF3-203ENST00000475482 VKORC1Q9BQB6 163 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 FAM173AQ9BQD7 235 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 CNPPD1Q9BV87 410 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 WWTR1Q9GZV5 400 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 SACM1LQ9NTJ5 587 aa14.32□□□□□ -0.12
CPSF3-203ENST00000475482 CCM2LQ9NUG4 571 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms