RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 HOXD1Q9GZZ0 328 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 POLR2J3Q9H1A7 115 aaKnown RBP12.68□□□□□ -0.38
TRAF4-210ENST00000475329 KRT84Q9NSB2 600 aa12.68□□□□□ -0.38
TRAF4-210ENST00000475329 LOC102723996A0A087X1L8 192 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 TRBV4-1A0A0J9YWV2 114 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-210ENST00000475329 A0A1W2PRQ8 180 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 CPSF4LA6NMK7 179 aaKnown RBP12.67□□□□□ -0.38
TRAF4-210ENST00000475329 DKK1O94907 266 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 OR5F1O95221 314 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 IGHEP01854 428 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 ITGAMP11215 1152 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 MYF6P23409 242 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 IL12BP29460 328 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 NR0B1P51843 470 aaKnown RBP12.67□□□□□ -0.38
TRAF4-210ENST00000475329 LIMK1P53667 647 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 SLC26A5P58743 744 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 RNF4P78317 190 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 IL1RL1Q01638 556 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 PLCXD2Q0VAA5 305 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 PIN1Q13526 163 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-210ENST00000475329 DGCR6Q14129 220 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 FGFBP1Q14512 234 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 C3orf38Q5JPI3 329 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 TTC23Q5W5X9 447 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 HSDL2Q6YN16 418 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 GALNT5Q7Z7M9 940 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 GRAMD2AQ8IUY3 354 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 SLC34A3Q8N130 599 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 SLC5A8Q8N695 610 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF441Q8N8Z8 693 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 APCDD1LQ8NCL9 501 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 EFHD2Q96C19 240 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-210ENST00000475329 LMF1Q96S06 567 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 FEVQ99581 238 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 ANKRD19PQ9H560 264 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 TESQ9UGI8 421 aaKnown RBP12.67□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF223Q9UK11 482 aaPredicted RBP12.67□□□□□ -0.38
TRAF4-210ENST00000475329 PADI1Q9ULC6 663 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 POFUT2Q9Y2G5 429 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 PTPRBP23467 1997 aa12.67□□□□□ -0.38
TRAF4-210ENST00000475329 TRBV11-1A0A0K0K1C0 115 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 A0A1W2PNU3 283 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 C9orf172C9J069 976 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 PRKNO60260 465 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 FMO6PO60774 539 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 MITFO75030 526 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 KLF7O75840 302 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 UMODP07911 640 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 RAB40ALP0C0E4 278 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 FTH1P19P0C7X4 201 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 UBTFL6P0CB48 400 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 RNF144AP50876 292 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF136P52737 540 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 CHN2P52757 468 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 ST3GAL3Q11203 375 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 FOXD4Q12950 439 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 KCNAB2Q13303 367 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 TRAM2Q15035 370 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 ENTPD8Q5MY95 495 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 KRT80Q6KB66 452 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 UGT2A3Q6UWM9 527 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 TSPYL5Q86VY4 417 aaPredicted RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 LINC00471Q8N535 108 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 OR9Q2Q8NGE9 314 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 OR8K3Q8NH51 312 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 NUBPLQ8TB37 319 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 CT55Q8WUE5 264 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 CNOT9Q92600 299 aaKnown RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 DIO2Q92813 273 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 SLC35B4Q969S0 331 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 TP53INP1Q96A56 240 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 C8orf44Q96CB5 159 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF559Q9BR84 538 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 MESP1Q9BRJ9 268 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 FUZQ9BT04 418 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 NRSN2Q9GZP1 204 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 RIBC2Q9H4K1 309 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 ZNF556Q9HAH1 456 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 CTPS2Q9NRF8 586 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 PAPOLBQ9NRJ5 636 aaKnown RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 UBQLN4Q9NRR5 601 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 MAN2C1Q9NTJ4 1040 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 FAM118AQ9NWS6 357 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 DNAJB12Q9NXW2 375 aaKnown RBP12.66□□□□□ -0.38
TRAF4-210ENST00000475329 UBAP1Q9NZ09 502 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 SLC35A3Q9Y2D2 325 aa12.66□□□□□ -0.38
TRAF4-210ENST00000475329 SPAARA0A1B0GVQ0 90 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 SH3PXD2BA1X283 911 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 CDC14CA4D256 554 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 MAGEA13PA6NCF6 341 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 SERINC4A6NH21 518 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 SCDO00767 359 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 TSPAN2O60636 221 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 TPST2O60704 377 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 UGT2B11O75310 529 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 REM1O75628 298 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 CYP7B1O75881 506 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 UTS2O95399 124 aa12.65□□□□□ -0.38
TRAF4-210ENST00000475329 ADAP00813 363 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms