RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SFRP5Q5T4F7 317 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 C6orf52Q5T4I8 152 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 HBMQ6B0K9 141 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 FIGNL1Q6PIW4 674 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 GALNT10Q86SR1 603 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 GABRG1Q8N1C3 465 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 PLD6Q8N2A8 252 aaKnown RBP11.23□□□□□ -0.61
SKA3-206ENST00000475251 OR2V1Q8NHB1 315 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 C16orf78Q8WTQ4 265 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 ROBO4Q8WZ75 1007 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 KISS1RQ969F8 398 aaPredicted RBP11.23□□□□□ -0.61
SKA3-206ENST00000475251 ADAD1Q96M93 576 aaKnown RBP11.23□□□□□ -0.61
SKA3-206ENST00000475251 HBEGFQ99075 208 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 MRPL57Q9BQC6 102 aaKnown RBP11.23□□□□□ -0.61
SKA3-206ENST00000475251 C1QTNF3Q9BXJ4 246 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 RTN4RQ9BZR6 473 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 MRPL46Q9H2W6 279 aaKnown RBP11.23□□□□□ -0.61
SKA3-206ENST00000475251 L2HGDHQ9H9P8 463 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 GP6Q9HCN6 339 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 TIGARQ9NQ88 270 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 MIEF1Q9NQG6 463 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 FBXO34Q9NWN3 711 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 FLRT3Q9NZU0 649 aa11.23□□□□□ -0.61
SKA3-206ENST00000475251 MYO1GB0I1T2 1018 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 MANBAO00462 879 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 TNFSF11O14788 317 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 RAD51CO43502 376 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 NDUFB5O43674 189 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 GMFGO60234 142 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 GCM2O75603 506 aaPredicted RBP11.22□□□□□ -0.61
SKA3-206ENST00000475251 OR4F21O95013 312 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 UTS2O95399 124 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 JUNP05412 331 aaKnown RBP11.22□□□□□ -0.61
SKA3-206ENST00000475251 DDCP20711 480 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 HMOX2P30519 316 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 TIA1P31483 386 aaKnown RBP eCLIP11.22□□□□□ -0.61
SKA3-206ENST00000475251 NUDT6P53370 316 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 CDH13P55290 713 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 CLCQ05315 142 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 TAB1Q15750 504 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 PGGHGQ32M88 737 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 VPS26BQ4G0F5 336 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 TCHHL1Q5QJ38 904 aaPredicted RBP11.22□□□□□ -0.61
SKA3-206ENST00000475251 CPTPQ5TA50 214 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 AGAP6Q5VW22 663 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 GALNT18Q6P9A2 607 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 CLEC2AQ6UVW9 174 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 TMEM107Q6UX40 140 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 OR2L13Q8N349 312 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 MMGT1Q8N4V1 131 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 CDYL2Q8N8U2 506 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 BANPQ8N9N5 519 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 KBTBD8Q8NFY9 601 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 FBXO25Q8TCJ0 367 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 ACTRT2Q8TDY3 377 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 RNF128Q8TEB7 428 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 CPNE4Q96A23 557 aaPredicted RBP11.22□□□□□ -0.61
SKA3-206ENST00000475251 LMF2Q9BU23 707 aaKnown RBP11.22□□□□□ -0.61
SKA3-206ENST00000475251 TRAF4Q9BUZ4 470 aaPredicted RBP11.22□□□□□ -0.61
SKA3-206ENST00000475251 TRIM2Q9C040 744 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 DMGDHQ9UI17 866 aaKnown RBP11.22□□□□□ -0.61
SKA3-206ENST00000475251 STK38LQ9Y2H1 464 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 CUBNO60494 3623 aa11.22□□□□□ -0.61
SKA3-206ENST00000475251 GJE1A6NN92 205 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 SHISA8B8ZZ34 492 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 ALG1L2C9J202 215 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 UPK1AO00322 258 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 SSX4O60224 188 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 PSMG1O95456 288 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 NGFRP08138 427 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 ANXA4P09525 319 aaPredicted RBP11.21□□□□□ -0.61
SKA3-206ENST00000475251 IFI6P09912 130 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 CTAGE8P0CG41 777 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 EIF1P41567 113 aaKnown RBP11.21□□□□□ -0.61
SKA3-206ENST00000475251 CARD18P57730 90 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 RAE1P78406 368 aaKnown RBP11.21□□□□□ -0.61
SKA3-206ENST00000475251 GUCY2DQ02846 1103 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 BSPH1Q075Z2 132 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 ZNF763Q0D2J5 394 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 ITGADQ13349 1161 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 MFSD12Q6NUT3 480 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 TFAP2EQ6VUC0 442 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 RPS27LQ71UM5 84 aaKnown RBP11.21□□□□□ -0.61
SKA3-206ENST00000475251 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.21□□□□□ -0.61
SKA3-206ENST00000475251 DTX2Q86UW9 622 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 TDRPQ86YL5 185 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 CTAGE4Q8IX94 777 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 SPATA4Q8NEY3 305 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 PIWIL2Q8TC59 973 aaKnown RBP11.21□□□□□ -0.61
SKA3-206ENST00000475251 METTL6Q8TCB7 284 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 OSTF1Q92882 214 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 RADILQ96JH8 1075 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 KLHL15Q96M94 604 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 TNFRSF13CQ96RJ3 184 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 IQCGQ9H095 443 aaKnown RBP11.21□□□□□ -0.61
SKA3-206ENST00000475251 SHARPINQ9H0F6 387 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 TAS2R7Q9NYW3 318 aa11.21□□□□□ -0.61
SKA3-206ENST00000475251 CISD1Q9NZ45 108 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms