RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 CNOT4O95628 575 aaKnown RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 PLAUP00749 431 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 IFI6P09912 130 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 MYL2P10916 166 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 PRPS2P11908 318 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 PPP3CBP16298 524 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 ZNF17P17021 662 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 GPC1P35052 558 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 PRKAG1P54619 331 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 CTBP2P56545 445 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 SLC29A2Q14542 456 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 CTU2Q2VPK5 515 aaKnown RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 ZYG11AQ6WRX3 759 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 STAC2Q6ZMT1 411 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 ZNF704Q6ZNC4 412 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 FRMD7Q6ZUT3 714 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 TRMT10CQ7L0Y3 403 aaKnown RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 WDR75Q8IWA0 830 aaKnown RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 OR4C3Q8NH37 302 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 FBXO30Q8TB52 745 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 MZB1Q8WU39 189 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 IGFBPL1Q8WX77 278 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 HOXB13Q92826 284 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 CIDECQ96AQ7 238 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 CCDC126Q96EE4 140 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 ADGRG7Q96K78 797 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 PSMC3IPQ9P2W1 217 aaPredicted RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 TBK1Q9UHD2 729 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 DCDC2Q9UHG0 476 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 RAB21Q9UL25 225 aa12.86□□□□□ -0.35
COL2A1-205ENST00000474996 MCTS1Q9ULC4 181 aaKnown RBP12.86□□□□□ -0.35
COL2A1-205ENST00000474996 A0A1W2PPM1 405 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 INAFM1C9JVW0 142 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 H3BQF6 201 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 PDPK1O15530 556 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 CXCL13O43927 109 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 SEC22BO75396 215 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 NKX2-2O95096 273 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 SYNGR4O95473 234 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 OXSR1O95747 527 aaPredicted RBP12.85□□□□□ -0.35
COL2A1-205ENST00000474996 IL11P20809 199 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 MAP3K8P41279 467 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 KIAA0040Q15053 153 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 FIGNL1Q6PIW4 674 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 SH2D5Q6ZV89 423 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 SZRD1Q7Z422 152 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 WFDC8Q8IUA0 241 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 GTPBP8Q8N3Z3 284 aaPredicted RBP12.85□□□□□ -0.35
COL2A1-205ENST00000474996 TMEM171Q8WVE6 324 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 PLPPR2Q96GM1 343 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 RNF145Q96MT1 663 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 TMEM185BQ9H7F4 350 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 PAQR5Q9NXK6 330 aaPredicted RBP12.85□□□□□ -0.35
COL2A1-205ENST00000474996 CCL27Q9Y4X3 112 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 PTGDR2Q9Y5Y4 395 aa12.85□□□□□ -0.35
COL2A1-205ENST00000474996 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 A0A087WZY1 265 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 A0A1W2PRB8 838 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 TNFSF11O14788 317 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 ADAMDEC1O15204 470 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 GLRA3O75311 464 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 PROCP04070 461 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 NGFRP08138 427 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 ACP2P11117 423 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 PSMA4P25789 261 aaKnown RBP12.84□□□□□ -0.35
COL2A1-205ENST00000474996 ZNF41P51814 821 aaPredicted RBP12.84□□□□□ -0.35
COL2A1-205ENST00000474996 NR1H2P55055 460 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 RAC1P63000 192 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 PPP2R2BQ00005 443 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 SLC18A2Q05940 514 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 PLPPR5Q32ZL2 321 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 VPS26BQ4G0F5 336 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 ZNF385BQ569K4 471 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 CFAP157Q5JU67 520 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 CLEC6AQ6EIG7 209 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 ZAR1Q86SH2 424 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 IFT20Q8IY31 132 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 CDRT4Q8N9R6 151 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 SLC16A11Q8NCK7 471 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 NUP43Q8NFH3 380 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 ZFP28Q8NHY6 868 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 ZBTB8AQ96BR9 441 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 GIMAP5Q96F15 307 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 OTUB1Q96FW1 271 aaPredicted RBP12.84□□□□□ -0.35
COL2A1-205ENST00000474996 SH3YL1Q96HL8 342 aaPredicted RBP12.84□□□□□ -0.35
COL2A1-205ENST00000474996 MDFIQ99750 246 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 KLHDC3Q9BQ90 382 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 RHOXF2Q9BQY4 288 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 ACTR6Q9GZN1 396 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 C12orf49Q9H741 205 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 LRTM1Q9HBL6 345 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 MED17Q9NVC6 651 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 FBXO34Q9NWN3 711 aa12.84□□□□□ -0.35
COL2A1-205ENST00000474996 A0A0J9YW62 118 aa12.83□□□□□ -0.36
COL2A1-205ENST00000474996 C7orf72A4D263 438 aa12.83□□□□□ -0.36
COL2A1-205ENST00000474996 HS3ST1O14792 307 aa12.83□□□□□ -0.36
COL2A1-205ENST00000474996 AKAP10O43572 662 aa12.83□□□□□ -0.36
COL2A1-205ENST00000474996 KCNK2O95069 426 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms