RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PPIAL4CA0A0B4J2A2 164 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FAM90A7PA6NKC0 464 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FAM90A22PA8MWA6 464 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FAM90A12PA8MX19 464 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FAM90A23PA8MXZ1 464 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PPIAL4DF5H284 164 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 NRP1O14786 923 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 EPHB6O15197 1021 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OIP5O43482 229 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 LRP3O75074 770 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SEMA7AO75326 666 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RP2O75695 350 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CNIH1O95406 144 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 B3GALT4O96024 378 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 C1QBP02746 253 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SHBGP04278 402 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PPIAL4FP0DN26 164 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SCGB1A1P11684 91 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ST6GAL1P15907 406 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 NCK1P16333 377 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CD82P27701 267 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 KIR2DL1P43626 348 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 SLC6A12P48065 614 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CTSWP56202 376 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 GNG11P61952 73 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RPL7AP62424 266 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 GAB1Q13480 694 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 KRT81Q14533 505 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SLC9C1Q4G0N8 1177 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PRRT3Q5FWE3 981 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FGD3Q5JSP0 725 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 DNLZQ5SXM8 178 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PLET1Q6UQ28 207 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PRSS55Q6UWB4 352 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 LINGO4Q6UY18 593 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SIGLEC15Q6ZMC9 328 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FCRLAQ7L513 359 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ARPINQ7Z6K5 226 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 DNAJC22Q8N4W6 341 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 EMC1Q8N766 993 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 B3GNT7Q8NFL0 401 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SPATA22Q8NHS9 363 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ITFG1Q8TB96 612 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZFP90Q8TF47 636 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 UBTD2Q8WUN7 234 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF480Q8WV37 535 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CCDC107Q8WV48 283 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 LINC01599Q8WXQ3 324 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 GHSRQ92847 366 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PRMT6Q96LA8 375 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF347Q96SE7 839 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 VPS25Q9BRG1 176 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 BEX2Q9BXY8 128 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SEMA6AQ9H2E6 1030 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZNF639Q9UID6 485 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 RNF150Q9ULK6 438 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 BAIAP2Q9UQB8 552 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OAS3Q9Y6K5 1087 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 PHIPQ8WWQ0 1821 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MYO5BQ9ULV0 1848 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ABCC12Q96J65 1359 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 A2MP01023 1474 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ADAMTS12P58397 1594 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 A0A1W2PQD8 194 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FAM90A8PA6NJQ4 464 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 GRXCR1A8MXD5 290 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MMP20O60882 483 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ITGB2P05107 769 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SNRPCP09234 159 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 RAB40ALP0C0E4 278 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SLC35G4P0C7Q5 338 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TMEM253P0C7T8 217 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FAM90A13PP0C7W8 464 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FAM90A24PP0C7X0 464 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 SPP1P10451 314 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 IL2RBP14784 551 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 HIST1H1BP16401 226 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 CD247P20963 164 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PROZP22891 400 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 FMO4P31512 558 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CD47Q08722 323 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 HNRNPA0Q13151 305 aaKnown RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 TTLL4Q14679 1199 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CARTPTQ16568 116 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 MICAQ29983 383 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 AGAP6Q5VW22 663 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PTCRAQ6ISU1 281 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 ACSM6Q6P461 480 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 LDB1Q86U70 411 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 NOXA1Q86UR1 476 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TMPRSS6Q8IU80 811 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 AQP12AQ8IXF9 295 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 TMEM161BQ8NDZ6 487 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR9Q1Q8NGQ5 310 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 OR51A7Q8NH64 312 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 ZDHHC1Q8WTX9 485 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PPP1R13LQ8WUF5 828 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 PTPMT1Q8WUK0 201 aaPredicted RBP3.24□□□□□ -1.89
UBR3-208ENST00000474426 NXNL1Q96CM4 212 aa3.24□□□□□ -1.89
UBR3-208ENST00000474426 CMTM7Q96FZ5 175 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms