RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 LIN7CQ9NUP9 197 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 TREM2Q9NZC2 230 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 PHF11Q9UIL8 331 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 RWDD2AQ9UIY3 292 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SERTAD3Q9UJW9 196 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 GSTK1Q9Y2Q3 226 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 POLR3HQ9Y535 204 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ST14Q9Y5Y6 855 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 MROH7-TTC4A0A0A0MT08 1334 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FANCMQ8IYD8 2048 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 LNP1A1A4G5 178 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 TRABD2BA6NFA1 517 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 LEFTY2O00292 366 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 P2RY10O00398 339 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 PRMT5O14744 637 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 UGT1A9O60656 530 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 RAMP3O60896 148 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 HUS1O60921 280 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 OR2F2O95006 317 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 CER1O95813 267 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 MOCS2O96007 188 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 WNT11O96014 354 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 IFNA21P01568 189 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FGGP02679 453 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 AMY2AP04746 511 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FTH1P19P0C7X4 201 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 OCM2P0CE71 109 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 RRASP10301 218 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 EPXP11678 715 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 MMP9P14780 707 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 GOT1P17174 413 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 AMY2BP19961 511 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 NDUFS1P28331 727 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SSTR2P30874 369 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 KDELR2P33947 212 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 PNPLA4P41247 253 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 GLUD2P49448 558 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SUOXP51687 545 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 PLA2G16P53816 162 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 MYBPC1Q00872 1141 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 IFITM2Q01629 132 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ACOX1Q15067 660 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 CERCAMQ5T4B2 595 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 NT5DC1Q5TFE4 455 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 PRAMEF13Q5VWM6 474 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 TRIQKQ629K1 86 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 H3F3CQ6NXT2 135 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 B3GLCTQ6Y288 498 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SLCO4C1Q6ZQN7 724 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 AQP12AQ8IXF9 295 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 LRRC18Q8N456 261 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ARRDC3Q96B67 414 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 TM4SF19Q96DZ7 209 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 HOPXQ9BPY8 73 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 DCUN1D5Q9BTE7 237 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 MRI1Q9BV20 369 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 NPLQ9BXD5 320 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FAM83DQ9H4H8 585 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 ACTL8Q9H568 366 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SYNPO2LQ9H987 977 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 UGT1A7Q9HAW7 530 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 UGT1A10Q9HAW8 530 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 UGT1A8Q9HAW9 530 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 JPH1Q9HDC5 661 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 VNN3Q9NY84 501 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 GLS2Q9UI32 602 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FBXO4Q9UKT5 387 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 KCNJ14Q9UNX9 436 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 FOXA2Q9Y261 457 aaPredicted RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 DRG1Q9Y295 367 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SPG11Q96JI7 2443 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 SCN9AQ15858 1988 aa5.66□□□□□ -1.5
SMARCE1-208ENST00000474246 UMODL1Q5DID0 1318 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ZNF785A8K8V0 405 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 PSMD12O00232 456 aaPredicted RBP5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 B4GALT5O43286 388 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 FADS1O60427 444 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ALDOAP04075 364 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ITGB2P05107 769 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 TSPAN8P19075 237 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ITIH2P19823 946 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 OGNP20774 298 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 KLRC2P26717 231 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ERP29P30040 261 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 NTSR1P30989 418 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 CA5AP35218 305 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 CYB561P49447 251 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 VEGFCP49767 419 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 NOVA1P51513 510 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 MLLT10P55197 1068 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ZP1P60852 638 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 LSM6P62312 80 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 KEAP1Q14145 624 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ELAVL3Q14576 367 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 KPNB1Q14974 876 aaKnown RBP5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 DPY19L1Q2PZI1 675 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 QRICH1Q2TAL8 776 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ADPRMQ3LIE5 342 aa5.65□□□□□ -1.5
SMARCE1-208ENST00000474246 ITPRIPL2Q3MIP1 535 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms