RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ZNF621Q6ZSS3 439 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 C16orf62Q7Z3J2 963 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 CCDC71Q8IV32 467 aaPredicted RBP12.91□□□□□ -0.34
VAMP4-203ENST00000474047 CKAP2Q8WWK9 683 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 CCDC115Q96NT0 180 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 TRIB1Q96RU8 372 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ZIM2Q9NZV7 527 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 FAM215AQ9Y5M1 114 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 KCNE3Q9Y6H6 103 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 PHF3Q92576 2039 aaKnown RBP12.91□□□□□ -0.34
VAMP4-203ENST00000474047 CCDC154A6NI56 674 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ZNF195O14628 629 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 SCN2BO60939 215 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ANP32DO95626 131 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 IL12AP29459 219 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ZFP36L2P47974 494 aaKnown RBP12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ANXA11P50995 505 aaKnown RBP12.91□□□□□ -0.34
VAMP4-203ENST00000474047 AQP5P55064 265 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ZNF630Q2M218 657 aaPredicted RBP12.91□□□□□ -0.34
VAMP4-203ENST00000474047 EXOSC6Q5RKV6 272 aaKnown RBP12.91□□□□□ -0.34
VAMP4-203ENST00000474047 APOOLQ6UXV4 268 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 CHMP1BQ7LBR1 199 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ZAR1Q86SH2 424 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 MISPQ8IVT2 679 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 ZNF614Q8N883 585 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 FADS6Q8N9I5 356 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 XAGE5Q8WWM1 108 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 WDYHV1Q96HA8 205 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 RTN4RQ9BZR6 473 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 PRDM14Q9GZV8 571 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 OR51I1Q9H343 314 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 RUBCNLQ9H714 662 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 RMND5AQ9H871 391 aa12.91□□□□□ -0.34
VAMP4-203ENST00000474047 UTP20O75691 2785 aaKnown RBP12.9□□□□□ -0.34
VAMP4-203ENST00000474047 NCOA6Q14686 2063 aaPredicted RBP12.9□□□□□ -0.34
VAMP4-203ENST00000474047 FAM90A27PA6NNH2 459 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 GTPBP1O00178 669 aaKnown RBP12.9□□□□□ -0.34
VAMP4-203ENST00000474047 ZIC3O60481 467 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 AK1P00568 194 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 IL2RAP01589 272 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 CHMP24386 653 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 MSX1P28360 303 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 DCTP40126 519 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 STARP49675 285 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 KHKP50053 298 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 IDH3AP50213 366 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 POLR2JP52435 117 aaKnown RBP12.9□□□□□ -0.34
VAMP4-203ENST00000474047 DCST1Q5T197 706 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 ZNF787Q6DD87 383 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 TNFAIP8L2Q6P589 184 aaPredicted RBP12.9□□□□□ -0.34
VAMP4-203ENST00000474047 PHOSPHO1Q8TCT1 267 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 SH3YL1Q96HL8 342 aaPredicted RBP12.9□□□□□ -0.34
VAMP4-203ENST00000474047 KCNJ16Q9NPI9 418 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 SDR39U1Q9NRG7 319 aaPredicted RBP12.9□□□□□ -0.34
VAMP4-203ENST00000474047 STOML1Q9UBI4 398 aa12.9□□□□□ -0.34
VAMP4-203ENST00000474047 NPIPA5A0A0B4J1W7 369 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 NPIPA7E9PJI5 369 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 RFXANKO14593 260 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 STX11O75558 287 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 NUDT14O95848 222 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 EPPINO95925 133 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 GSNP06396 782 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 NPIPA8P0DM63 369 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 OR12D1P0DN82 309 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 CPN1P15169 458 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 POU3F2P20265 443 aaPredicted RBP12.89□□□□□ -0.35
VAMP4-203ENST00000474047 ZNF41P51814 821 aaPredicted RBP12.89□□□□□ -0.35
VAMP4-203ENST00000474047 GFRA1P56159 465 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 GPR68Q15743 365 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 ACSF3Q4G176 576 aaPredicted RBP12.89□□□□□ -0.35
VAMP4-203ENST00000474047 LACC1Q8IV20 430 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 LILRB4Q8NHJ6 448 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 NEURL3Q96EH8 262 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 C1GALT1C1Q96EU7 318 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 ITCHQ96J02 903 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 SDF2Q99470 211 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 PIGQQ9BRB3 760 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 INPP5KQ9BT40 448 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 CCDC28BQ9BUN5 200 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 VDAC3Q9Y277 283 aa12.89□□□□□ -0.35
VAMP4-203ENST00000474047 A0A0G2JNJ9 132 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 A0A1W2PQD3 144 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 HSPB2A8KAH6 182 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 LINC01387J3KSC0 135 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 HCRTR2O43614 444 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 PEPDP12955 493 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 GRNP28799 593 aaKnown RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 ATP12AP54707 1039 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 HPCAP84074 193 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 CDSNQ15517 529 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 HSPB2Q16082 182 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 ARHGAP11BQ3KRB8 267 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 GLYR1Q49A26 553 aaPredicted RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 C6orf10Q5SRN2 563 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 RIPPLY2Q5TAB7 128 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 SAXO2Q658L1 398 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
VAMP4-203ENST00000474047 UBQLNLQ8IYU4 475 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 MEIOBQ8N635 442 aa12.88□□□□□ -0.35
VAMP4-203ENST00000474047 ARFGAP2Q8N6H7 521 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms