RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 NR2F1P10589 423 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 GABRA1P14867 456 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 HK1P19367 917 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 PPIBP23284 216 aaKnown RBP12.51□□□□□ -0.41
USF1-205ENST00000473969 ZNF630Q2M218 657 aaPredicted RBP12.51□□□□□ -0.41
USF1-205ENST00000473969 RPTNQ6XPR3 784 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 C3P1Q6ZMU1 363 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 ZAR1Q86SH2 424 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 FUNDC1Q8IVP5 155 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 CHERPQ8IWX8 916 aaKnown RBP12.51□□□□□ -0.41
USF1-205ENST00000473969 FADS6Q8N9I5 356 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 OR2M3Q8NG83 312 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 ZFP90Q8TF47 636 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 ROPN1LQ96C74 230 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 SFXN2Q96NB2 322 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 PHF12Q96QT6 1004 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 VKORC1Q9BQB6 163 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 OR2B2Q9GZK3 357 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 SERHL2Q9H4I8 314 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 CACYBPQ9HB71 228 aaKnown RBP12.51□□□□□ -0.41
USF1-205ENST00000473969 PNPLA3Q9NST1 481 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 STOML1Q9UBI4 398 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 TNFRSF10DQ9UBN6 386 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 MKLN1Q9UL63 735 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 CAMK2AQ9UQM7 478 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 RPH3AQ9Y2J0 694 aaPredicted RBP12.51□□□□□ -0.41
USF1-205ENST00000473969 MEMO1Q9Y316 297 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 NDUFAF1Q9Y375 327 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 MRPS18CQ9Y3D5 142 aaKnown RBP12.51□□□□□ -0.41
USF1-205ENST00000473969 DTNAQ9Y4J8 743 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 NAV2Q8IVL1 2488 aa12.51□□□□□ -0.41
USF1-205ENST00000473969 EML6Q6ZMW3 1958 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 ZGRF1Q86YA3 2104 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 NPIPA5A0A0B4J1W7 369 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 A0A1W2PP18 115 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 CLEC18AA5D8T8 446 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 NPIPA7E9PJI5 369 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 CLIC1O00299 241 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 HMGN4O00479 90 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 NUDT14O95848 222 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 LDLRP01130 860 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 NPIPA8P0DM63 369 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 BMP7P18075 431 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 TCEA1P23193 301 aaKnown RBP12.5□□□□□ -0.41
USF1-205ENST00000473969 ACVR2AP27037 513 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 PTGER4P35408 488 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 ZNF41P51814 821 aaPredicted RBP12.5□□□□□ -0.41
USF1-205ENST00000473969 SRSF1Q07955 248 aaKnown RBP eCLIP12.5□□□□□ -0.41
USF1-205ENST00000473969 GNA13Q14344 377 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 RAET1LQ5VY80 246 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 VASNQ6EMK4 673 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 HEPHL1Q6MZM0 1159 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 CLEC18BQ6UXF7 455 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 APOOLQ6UXV4 268 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 CLEC18CQ8NCF0 446 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 B4GALNT2Q8NHY0 566 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 TSPEARQ8WU66 669 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 SH3YL1Q96HL8 342 aaPredicted RBP12.5□□□□□ -0.41
USF1-205ENST00000473969 TIMP4Q99727 224 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 NMUR2Q9GZQ4 415 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 ZNF350Q9GZX5 532 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 PAIP1Q9H074 479 aaKnown RBP12.5□□□□□ -0.41
USF1-205ENST00000473969 COQ3Q9NZJ6 369 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 CALML5Q9NZT1 146 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 SPRR3Q9UBC9 169 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 P2RX2Q9UBL9 471 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.5□□□□□ -0.41
USF1-205ENST00000473969 PCDHB14Q9Y5E9 798 aa12.5□□□□□ -0.41
USF1-205ENST00000473969 SPENQ96T58 3664 aaKnown RBP12.5□□□□□ -0.41
USF1-205ENST00000473969 UBR5O95071 2799 aaPredicted RBP12.49□□□□□ -0.41
USF1-205ENST00000473969 NUP214P35658 2090 aaPredicted RBP12.49□□□□□ -0.41
USF1-205ENST00000473969 EXPH5Q8NEV8 1989 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 A0A087WZY1 265 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 IGLV3-32A0A0A0MS00 114 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 EVPLLA8MZ36 301 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 AHRRA9YTQ3 701 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 LINC01387J3KSC0 135 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 HCRTR2O43614 444 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 FCMRO60667 390 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 ZG16O60844 167 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 GUSBP08236 651 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 SNRPB2P08579 225 aaKnown RBP12.49□□□□□ -0.41
USF1-205ENST00000473969 CAPN3P20807 821 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 DSTNP60981 165 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 MAPRE2Q15555 327 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 MMEL1Q495T6 779 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 GLYR1Q49A26 553 aaPredicted RBP12.49□□□□□ -0.41
USF1-205ENST00000473969 GTDC1Q4AE62 458 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 KLHL26Q53HC5 615 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 NHSL2Q5HYW2 709 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 COX20Q5RI15 118 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.49□□□□□ -0.41
USF1-205ENST00000473969 PDZK1Q5T2W1 519 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 B3GNT6Q6ZMB0 384 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 CHMP1BQ7LBR1 199 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 CPLX4Q7Z7G2 160 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 ZNF619Q8N2I2 560 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 PHF10Q8WUB8 498 aaKnown RBP12.49□□□□□ -0.41
USF1-205ENST00000473969 OIT3Q8WWZ8 545 aa12.49□□□□□ -0.41
USF1-205ENST00000473969 C1GALT1C1Q96EU7 318 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms