RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 DCXO43602 365 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF821O75541 412 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 IGKV3-20P01619 116 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 IQCF3P0C7M6 154 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 HSMCR30P0CW71 290 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF44P15621 663 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 GNPDA1P46926 289 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 MNAT1P51948 309 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ATP12AP54707 1039 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 RWDD2BP57060 319 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 PJVKQ0ZLH3 352 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ELAVL2Q12926 359 aaKnown RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ZMYND11Q15326 602 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 MEDAGQ5VYS4 303 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 AP1ARQ63HQ0 302 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 PNCKQ6P2M8 343 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 HACD2Q6Y1H2 254 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF841Q6ZN19 808 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 Q6ZPB1 254 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 C16orf62Q7Z3J2 963 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 IFNEQ86WN2 208 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 CCDC71Q8IV32 467 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 PHC2Q8IXK0 858 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF679Q8IYX0 411 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 ZCCHC7Q8N3Z6 543 aaKnown RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 CLDN19Q8N6F1 224 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 EIF1ADQ8N9N8 165 aaKnown RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 Q8NBF4 154 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 C7orf34Q96L11 122 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 SUDS3Q9H7L9 328 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 CALHM2Q9HA72 323 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 MUTYHQ9UIF7 546 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 BARX2Q9UMQ3 279 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 DDX19BQ9UMR2 479 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 GSTK1Q9Y2Q3 226 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 LRP12Q9Y561 859 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 GMPPBQ9Y5P6 360 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 KLF2Q9Y5W3 355 aaPredicted RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 SUPT6HQ7KZ85 1726 aaKnown RBP3.49□□□□□ -1.85
BRCA1-212ENST00000473961 FAM135AQ9P2D6 1515 aa3.49□□□□□ -1.85
BRCA1-212ENST00000473961 SYNMO15061 1565 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 PIK3C2GO75747 1445 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 TEX48A0A1B0GUV7 120 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 H0Y8G0 127 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 K7EQG2 157 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 UBXN8O00124 270 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 PES1O00541 588 aaKnown RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 CXCL11O14625 94 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 OR1F1O43749 312 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 TSC22D2O75157 780 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 NEBLO76041 1014 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 TM7SF2O76062 418 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 OPN1LWP04000 364 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 CFC1BP0CG36 223 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 CFC1P0CG37 223 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 GCFC2P16383 781 aaKnown RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 SELEP16581 610 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 SDC1P18827 310 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 TBXA2RP21731 343 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ATP5A1P25705 553 aaKnown RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 RDXP35241 583 aaKnown RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 RPL34P49207 117 aaKnown RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 SULT1E1P49888 294 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ARHGDIAP52565 204 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ATP5IP56385 69 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 HAND2P61296 217 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 UBE2HP62256 183 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF85Q03923 595 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 FCHO2Q0JRZ9 810 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 GANABQ14697 944 aaKnown RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ZIC1Q15915 447 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 CELF3Q5SZQ8 465 aaKnown RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 LINC00242Q5T6M2 205 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ATF7IP2Q5U623 682 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 OR8G2PQ6IF36 304 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ZSCAN25Q6NSZ9 544 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 EMBQ6PCB8 327 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 USP43Q70EL4 1123 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 HSD11B1LQ7Z5J1 315 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ACOT1Q86TX2 421 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ANKFN1Q8N957 763 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 FAM133AQ8N9E0 248 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 STXBP6Q8NFX7 210 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 OR13C2Q8NGS9 318 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 OSTF1Q92882 214 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 POM121L2Q96KW2 1035 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 C9orf85Q96MD7 179 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 PLIN2Q99541 437 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 RIT2Q99578 217 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 TUBGCP2Q9BSJ2 902 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 CAPS2Q9BXY5 557 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 DUSP16Q9BY84 665 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 APMAPQ9HDC9 416 aa3.48□□□□□ -1.85
BRCA1-212ENST00000473961 THAP10Q9P2Z0 257 aaPredicted RBP3.48□□□□□ -1.85
BRCA1-212ENST00000473961 ANKRD50Q9ULJ7 1429 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 AK9Q5TCS8 1911 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 IGHV3OR16-12A0A075B7B8 117 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 A0A1B0GTH9 108 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 A0A1B0GUA9 196 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms