RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ZNF621Q6ZSS3 439 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 NCCRP1Q6ZVX7 275 aaPredicted RBP11.94□□□□□ -0.5
TPM3-216ENST00000473036 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 RNF130Q86XS8 419 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 GHDCQ8N2G8 530 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 C10orf111Q8N326 155 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 PCYOX1LQ8NBM8 494 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 PNPT1Q8TCS8 783 aaKnown RBP11.94□□□□□ -0.5
TPM3-216ENST00000473036 ADAMTS15Q8TE58 950 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 ZFP90Q8TF47 636 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 RAB8BQ92930 207 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 ZNF524Q96C55 264 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 ZNF597Q96LX8 424 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 PANX1Q96RD7 426 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 SDF2Q99470 211 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 NMUR2Q9GZQ4 415 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 SLC25A37Q9NYZ2 338 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.94□□□□□ -0.5
TPM3-216ENST00000473036 KCNE5Q9UJ90 142 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 TINAGQ9UJW2 476 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 PCDHGB4Q9UN71 923 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 WIF1Q9Y5W5 379 aa11.94□□□□□ -0.5
TPM3-216ENST00000473036 NCOA6Q14686 2063 aaPredicted RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 CCT8L1PA6NM43 557 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 ACOT7O00154 380 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 HMGN4O00479 90 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 NR5A2O00482 541 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 LRRTM2O43300 516 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 OIP5O43482 229 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 RRP9O43818 475 aaKnown RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 SLC19A2O60779 497 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 OXSR1O95747 527 aaPredicted RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 HPNP05981 417 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 PTGER4P35408 488 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 KRT20P35900 424 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 TRPC1P48995 793 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 RPP38P78345 283 aaKnown RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 KLF10Q13118 480 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 CYLC2Q14093 348 aaPredicted RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 SLC10A1Q14973 349 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 CD226Q15762 336 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 AGKQ53H12 422 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 DCST1Q5T197 706 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 RETREG3Q86VR2 466 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 LSRQ86X29 649 aaPredicted RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 DOLPP1Q86YN1 238 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 FADS6Q8N9I5 356 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 CHDHQ8NE62 594 aaPredicted RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 OR1J4Q8NGS1 313 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 DUSP19Q8WTR2 217 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 ZG16BQ96DA0 208 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 SPDL1Q96EA4 605 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 CCDC106Q9BWC9 280 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 ACKR4Q9NPB9 350 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 NDE1Q9NXR1 346 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 FAF1Q9UNN5 650 aaPredicted RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 NDUFAF1Q9Y375 327 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 PCDHB14Q9Y5E9 798 aa11.93□□□□□ -0.5
TPM3-216ENST00000473036 KLF2Q9Y5W3 355 aaPredicted RBP11.93□□□□□ -0.5
TPM3-216ENST00000473036 SETD2Q9BYW2 2564 aaPredicted RBP11.92□□□□□ -0.5
TPM3-216ENST00000473036 TACC2O95359 2948 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 DCHS2Q6V1P9 2916 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 TRBV5-3A0A0A0MS03 114 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 A0A1W2PP18 115 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 KDM4EB2RXH2 506 aaPredicted RBP11.92□□□□□ -0.5
TPM3-216ENST00000473036 ALG1L2C9J202 215 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 RFXANKO14593 260 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 ANGPT2O15123 496 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 ZIC3O60481 467 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 NGFRP08138 427 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 TBXA2RP21731 343 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 GDF1P27539 372 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 CA7P43166 264 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 MASP1P48740 699 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 PLAURQ03405 335 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 ART3Q13508 389 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 MAPK14Q16539 360 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 ARHGAP11BQ3KRB8 267 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 MMEL1Q495T6 779 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 WIPI1Q5MNZ9 446 aaPredicted RBP11.92□□□□□ -0.5
TPM3-216ENST00000473036 C3P1Q6ZMU1 363 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 YRDCQ86U90 279 aaKnown RBP11.92□□□□□ -0.5
TPM3-216ENST00000473036 PLCZ1Q86YW0 608 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 GATSQ8NAP1 163 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 FAM83FQ8NEG4 500 aaPredicted RBP11.92□□□□□ -0.5
TPM3-216ENST00000473036 OR2M3Q8NG83 312 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 NPAS1Q99742 590 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 DSN1Q9H410 356 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 IKZF5Q9H5V7 419 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 EFCAB1Q9HAE3 211 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 GID8Q9NWU2 228 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 QPCTLQ9NXS2 382 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 MED11Q9P086 117 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 SH3BGRL2Q9UJC5 107 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 ABCG2Q9UNQ0 655 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 SLC6A5Q9Y345 797 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 F8P00451 2351 aa11.92□□□□□ -0.5
TPM3-216ENST00000473036 PHF3Q92576 2039 aaKnown RBP11.91□□□□□ -0.5
TPM3-216ENST00000473036 IGLV3-32A0A0A0MS00 114 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms