RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 HOXD9P28356 352 aaPredicted RBP8.07□□□□□ -1.12
CD47-204ENST00000471694 MAGEA12P43365 314 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 RAB38P57729 211 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 SLC35A1P78382 337 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 GPR18Q14330 331 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 RGS21Q2M5E4 152 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 KCNIP4Q6PIL6 250 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 NAXDQ8IW45 347 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 FAM185AQ8N0U4 392 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 OR5M9Q8NGP3 310 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 TMBIM1Q969X1 311 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 RFT1Q96AA3 541 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 FAM46AQ96IP4 442 aaKnown RBP8.07□□□□□ -1.12
CD47-204ENST00000471694 C1GALT1Q9NS00 363 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 TBCCD1Q9NVR7 557 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 SDHAF2Q9NX18 166 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 MBTPS2O43462 519 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 SNAPC5O75971 98 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 CLIC3O95833 236 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 TACR3P29371 465 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 PTGER4P35408 488 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ETV5P41161 510 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 PRPS1P60891 318 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 PITX1P78337 314 aaPredicted RBP8.07□□□□□ -1.12
CD47-204ENST00000471694 HYAL1Q12794 435 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 FAM26DQ5JW98 314 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 KIF18BQ86Y91 864 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 TMEM130Q8N3G9 435 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 CBR4Q8N4T8 237 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 GLYATL2Q8WU03 294 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 C11orf40Q8WZ69 217 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 APH1AQ96BI3 265 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ZNF224Q9NZL3 707 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 A0A0G2JPF8 293 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 MBLAC1A4D2B0 266 aaPredicted RBP8.07□□□□□ -1.12
CD47-204ENST00000471694 HNRNPCL3B7ZW38 293 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ABCD4O14678 606 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 OR2T1O43869 369 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 CREG1O75629 220 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 GRPP07492 148 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 HNRNPCL4P0DMR1 293 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 PSMB5P28074 263 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 TGM4P49221 684 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 NKX3-2P78367 333 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 HSD17B12Q53GQ0 312 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 NANOGP8Q6NSW7 305 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 TECTBQ96PL2 329 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 WNT16Q9UBV4 365 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 STEAP1Q9UHE8 339 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 EXOSC1Q9Y3B2 195 aaKnown RBP8.07□□□□□ -1.12
CD47-204ENST00000471694 A6NHS1 94 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 CRYM-AS1A6NIL9 109 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 SUSD5O60279 629 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 NFYBP25208 207 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ACTC1P68032 377 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ACTA1P68133 377 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ADARB1P78563 741 aaKnown RBP8.07□□□□□ -1.12
CD47-204ENST00000471694 MPP7Q5T2T1 576 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 HES3Q5TGS1 186 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 TOMM5Q8N4H5 51 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 L3MBTL4Q8NA19 623 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 FAM83FQ8NEG4 500 aaPredicted RBP8.07□□□□□ -1.12
CD47-204ENST00000471694 C9orf43Q8TAL5 461 aaPredicted RBP8.07□□□□□ -1.12
CD47-204ENST00000471694 CDS1Q92903 461 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ZNF681Q96N22 645 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 FUCA2Q9BTY2 467 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ZDHHC2Q9UIJ5 367 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 ACSL6Q9UKU0 697 aa8.07□□□□□ -1.12
CD47-204ENST00000471694 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 PIGBOS1A0A0B4J2F0 54 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 IGHV3-20A0A0C4DH32 117 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 A0A0U1RQS6 177 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 S100A6P06703 90 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 AKR1C4P17516 323 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 HMGCLP35914 325 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 HAGHLQ6PII5 290 aaPredicted RBP8.06□□□□□ -1.12
CD47-204ENST00000471694 USP43Q70EL4 1123 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 PQLC1Q8N2U9 271 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 ACOT4Q8N9L9 421 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 SAT2Q96F10 170 aaPredicted RBP8.06□□□□□ -1.12
CD47-204ENST00000471694 BARD1Q99728 777 aaKnown RBP8.06□□□□□ -1.12
CD47-204ENST00000471694 AMBNQ9NP70 447 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 PLEKHJ1Q9NW61 149 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 EURLQ9NYK6 297 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 TESQ9UGI8 421 aaKnown RBP8.06□□□□□ -1.12
CD47-204ENST00000471694 LGI1O95970 557 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 GINS1Q14691 196 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 YRDCQ86U90 279 aaKnown RBP8.06□□□□□ -1.12
CD47-204ENST00000471694 VASH2Q86V25 355 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 LILRB2Q8N423 598 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 OR56B2PQ8NGI1 322 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 DUSP19Q8WTR2 217 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 TRMT61AQ96FX7 289 aaKnown RBP8.06□□□□□ -1.12
CD47-204ENST00000471694 RANBP9Q96S59 729 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 INIPQ9NRY2 104 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 MAN2C1Q9NTJ4 1040 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 RLIMQ9NVW2 624 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 PDE10AQ9Y233 779 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 CCDC88AQ3V6T2 1871 aa8.06□□□□□ -1.12
CD47-204ENST00000471694 KIF13AQ9H1H9 1805 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms