RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 TSPYL5Q86VY4 417 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 OR7G1Q8NGA0 311 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 OR4D11Q8NGI4 311 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 HDAC2Q92769 488 aaKnown RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 PRRC1Q96M27 445 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 PTCHD1Q96NR3 888 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 CCNL2Q96S94 520 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 ARMC7Q9H6L4 198 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 MKLN1Q9UL63 735 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 GMPPBQ9Y5P6 360 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 HEMK1Q9Y5R4 338 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 TGFBR3LH3BV60 316 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 M0R3H8 397 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 NME6O75414 186 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 LIFP15018 202 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 IL7RP16871 459 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 TNNI3P19429 210 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 OR1D4P47884 311 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 EMDP50402 254 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 ISL1P61371 349 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 ZNF267Q14586 743 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 VRK2Q86Y07 508 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 RBM45Q8IUH3 476 aaKnown RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 PARP8Q8N3A8 854 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 ESX1Q8N693 406 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 OR6T1Q8NGN1 323 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 DOK4Q8TEW6 326 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 ZG16BQ96DA0 208 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 QRSL1Q9H0R6 528 aaKnown RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 FOLH1BQ9HBA9 442 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 PRODH2Q9UF12 536 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 IL17BQ9UHF5 180 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 BLOC1S6Q9UL45 172 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 PADI1Q9ULC6 663 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 NDRG4Q9ULP0 352 aaKnown RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 A4GNTQ9UNA3 340 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 MGAT4BQ9UQ53 548 aa16.19■□□□□ 0.18
HSPG2-208ENST00000471322 ZNF443Q9Y2A4 671 aaPredicted RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 MRPS18BQ9Y676 258 aaKnown RBP16.19■□□□□ 0.18
HSPG2-208ENST00000471322 ZIC2O95409 532 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-208ENST00000471322 EPPINO95925 133 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 CCNYL3P0C7X3 344 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 CBLP22681 906 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 F8A1P23610 371 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 POLR2IP36954 125 aaKnown RBP16.18■□□□□ 0.18
HSPG2-208ENST00000471322 STAT5AP42229 794 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 CXADRP78310 365 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 LIN52Q52LA3 116 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 FGD3Q5JSP0 725 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 ARHGAP40Q5TG30 622 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 BROXQ5VW32 411 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 ISLR2Q6UXK2 745 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 LACC1Q8IV20 430 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 MR1Q95460 341 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 PITX2Q99697 317 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 GPN2Q9H9Y4 310 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-208ENST00000471322 MKKSQ9NPJ1 570 aaPredicted RBP16.18■□□□□ 0.18
HSPG2-208ENST00000471322 NECTIN3Q9NQS3 549 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 RHCGQ9UBD6 479 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 CHD6Q8TD26 2715 aa16.18■□□□□ 0.18
HSPG2-208ENST00000471322 SMIM31A0A1B0GVY4 71 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 E9PQ18 207 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 MEN1O00255 615 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 KIAA0513O60268 411 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 SEMA7AO75326 666 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 ADAP00813 363 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 TFAP2AP05549 437 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 ATP6V1B1P15313 513 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 TCN2P20062 427 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 RPS4Y1P22090 263 aaKnown RBP16.17■□□□□ 0.18
HSPG2-208ENST00000471322 ELAVL4P26378 380 aaKnown RBP16.17■□□□□ 0.18
HSPG2-208ENST00000471322 DLSTP36957 453 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 CLK3P49761 638 aaKnown RBP16.17■□□□□ 0.18
HSPG2-208ENST00000471322 RPP38P78345 283 aaKnown RBP16.17■□□□□ 0.18
HSPG2-208ENST00000471322 PIN1Q13526 163 aaPredicted RBP16.17■□□□□ 0.18
HSPG2-208ENST00000471322 GPR68Q15743 365 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 ZSWIM7Q19AV6 140 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 C6orf141Q5SZD1 244 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 FAM69BQ5VUD6 431 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 ZNF770Q6IQ21 691 aaPredicted RBP16.17■□□□□ 0.18
HSPG2-208ENST00000471322 RHBDD2Q6NTF9 364 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 CCDC81Q6ZN84 652 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 COMTD1Q86VU5 262 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 AQP11Q8NBQ7 271 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 TOR1AIP2Q8NFQ8 470 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 FBLIM1Q8WUP2 373 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 PIK3R3Q92569 461 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 HRASLS5Q96KN8 279 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 VSTM2LQ96N03 204 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 POLR2J2Q9GZM3 115 aaKnown RBP16.17■□□□□ 0.18
HSPG2-208ENST00000471322 POLR2J3Q9H1A7 115 aaKnown RBP16.17■□□□□ 0.18
HSPG2-208ENST00000471322 ANKRD19PQ9H560 264 aa16.17■□□□□ 0.18
HSPG2-208ENST00000471322 TRBV4-1A0A0J9YWV2 114 aa16.16■□□□□ 0.18
HSPG2-208ENST00000471322 TRIM64CA6NLI5 447 aa16.16■□□□□ 0.18
HSPG2-208ENST00000471322 AP3D1O14617 1153 aa16.16■□□□□ 0.18
HSPG2-208ENST00000471322 HBQ1P09105 142 aa16.16■□□□□ 0.18
HSPG2-208ENST00000471322 TRHRP34981 398 aaPredicted RBP16.16■□□□□ 0.18
HSPG2-208ENST00000471322 RORAP35398 523 aa16.16■□□□□ 0.18
HSPG2-208ENST00000471322 HLCSP50747 726 aa16.16■□□□□ 0.18
HSPG2-208ENST00000471322 NUP107P57740 925 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms