RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CSF1P09603 554 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 LGALS4P56470 323 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CARD18P57730 90 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SLC9A3R2Q15599 337 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SLC22A10Q63ZE4 541 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 BRAT1Q6PJG6 821 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 LRRC25Q8N386 305 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PEX11GQ96HA9 241 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 RNF170Q96K19 258 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 UBL7Q96S82 380 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PDZD7Q9H5P4 517 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PLEK2Q9NYT0 353 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 GAB2Q9UQC2 676 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 TECPR2O15040 1411 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 TRAPPC2LH3BP13 241 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 FOXD2O60548 495 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 LRCH4O75427 683 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PABPC4LP0CB38 370 aaKnown RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 APEHP13798 732 aaKnown RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CLDN6P56747 220 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SLC7A9P82251 487 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 GAB1Q13480 694 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SF3B4Q15427 424 aaKnown RBP eCLIP6.53□□□□□ -1.362e-6■■■□□ 15.1
BRCA1-210ENST00000471181 OR8B8Q15620 311 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ADIRFQ15847 76 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF74Q16587 644 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ARHGAP11BQ3KRB8 267 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 NDUFAF5Q5TEU4 345 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PRAMEF8Q5VWM4 474 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PRAMEF7Q5VXH5 474 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 USP53Q70EK8 1073 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SSX9Q7RTT3 188 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SLC24A4Q8NFF2 622 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SCAMP5Q8TAC9 235 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PIGCQ92535 297 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ADIPOR1Q96A54 375 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF597Q96LX8 424 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 TSSK2Q96PF2 358 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SOX17Q9H6I2 414 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 NMNAT1Q9HAN9 279 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 OLAHQ9NV23 265 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 GIMAP2Q9UG22 337 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SLC2A6Q9UGQ3 507 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 POLHQ9Y253 713 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CACNG2Q9Y698 323 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PXDNLA1KZ92 1463 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 RNF212BA8MTL3 300 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 BET1O15155 118 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CNIH1O95406 144 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 POU3F2P20265 443 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SSTR2P30874 369 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 BMXP51813 675 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 KCNC3Q14003 757 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 HNRNPDQ14103 355 aaKnown RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 TEAD2Q15562 447 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF542PQ5EBM4 170 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CNKSR3Q6P9H4 555 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 TRMT10BQ6PF06 316 aaKnown RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PRICKLE2Q7Z3G6 844 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ABHD12BQ7Z5M8 362 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 KRTCAP2Q8N6L1 136 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SYT14Q8NB59 555 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 OR11L1Q8NGX0 322 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 OR2T4Q8NH00 348 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ZFAND1Q8TCF1 268 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 C2orf15Q8WU43 125 aaKnown RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 FOXRED1Q96CU9 486 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 AKR1E2Q96JD6 320 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 LRR1Q96L50 414 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 BMFQ96LC9 184 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 DCBLD2Q96PD2 775 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 DOHHQ9BU89 302 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ERVMER34-1Q9H9K5 563 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 GPR160Q9UJ42 338 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 RARRES3Q9UL19 164 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CA14Q9ULX7 337 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 UBIAD1Q9Y5Z9 338 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 A0A096LPI6 279 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PRAMEF27A3QJZ7 478 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 TRAPPC13A5PLN9 417 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 MT-ND4P03905 459 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 FOLR1P15328 257 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 LMO2P25791 158 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CD1CP29017 333 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CDC34P49427 236 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PPT1P50897 306 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 HSD17B7P56937 341 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ABHD18Q0P651 414 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 DEFB134Q4QY38 66 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 METTL11BQ5VVY1 283 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 PRAMEF9Q5VWM5 478 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 LARP4Q71RC2 724 aaKnown RBP eCLIP6.53□□□□□ -1.36
BRCA1-210ENST00000471181 NLRC3Q7RTR2 1065 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CSNK1A1LQ8N752 337 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ABHD11Q8NFV4 315 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 OR51L1Q8NGJ5 315 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 OR5D16Q8NGK9 328 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 OR9I1Q8NGQ6 314 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms