RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 SLC25A42Q86VD7 318 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 GRAMD2AQ8IUY3 354 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 OR2T34Q8NGX1 318 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 RFESDQ8TAC1 157 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 FNDC8Q8TC99 324 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 C11orf24Q96F05 449 aaPredicted RBP3.23□□□□□ -1.89
PRPF3-204ENST00000470824 AKR1E2Q96JD6 320 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 C9orf85Q96MD7 179 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 SOSTQ9BQB4 213 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 FEM1AQ9BSK4 669 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 RPP25Q9BUL9 199 aaKnown RBP3.23□□□□□ -1.89
PRPF3-204ENST00000470824 COMMD4Q9H0A8 199 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 DHX33Q9H6R0 707 aaKnown RBP3.23□□□□□ -1.89
PRPF3-204ENST00000470824 GPN2Q9H9Y4 310 aaPredicted RBP3.23□□□□□ -1.89
PRPF3-204ENST00000470824 SENP1Q9P0U3 644 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 GALPQ9UBC7 116 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 KLK13Q9UKR3 277 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 BARX2Q9UMQ3 279 aaPredicted RBP3.23□□□□□ -1.89
PRPF3-204ENST00000470824 SNX6Q9UNH7 406 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 STYXL1Q9Y6J8 313 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 SETBP1Q9Y6X0 1596 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 TET3O43151 1660 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 DUOX2Q9NRD8 1548 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 JCADQ9P266 1359 aa3.23□□□□□ -1.89
PRPF3-204ENST00000470824 EP400Q96L91 3159 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 TCF20Q9UGU0 1960 aaKnown RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 ACOD1A6NK06 481 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 KRTAP16-1A8MUX0 517 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 LRRTM2O43300 516 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 DUX1O43812 170 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 LCMT2O60294 686 aaKnown RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 TBX19O60806 448 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 RAMP1O60894 148 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 MELTFP08582 738 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 ANXA3P12429 323 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 HNRNPA2B1P22626 353 aaKnown RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 ELK3P41970 407 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 RPL34P49207 117 aaKnown RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 ACADVLP49748 655 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 TATDN3Q17R31 274 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 LINC01620Q4KN68 170 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 DCST2Q5T1A1 773 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 SCYL2Q6P3W7 929 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 BLOC1S2Q6QNY1 142 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 REG3GQ6UW15 175 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 CES3Q6UWW8 571 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 PRSS48Q7RTY5 328 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 PPP1R42Q7Z4L9 355 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 SLC47A2Q86VL8 602 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 ZDHHC21Q8IVQ6 265 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 IPMKQ8NFU5 416 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 ITLN1Q8WWA0 313 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 TOMM40LQ969M1 308 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 DHTKD1Q96HY7 919 aaPredicted RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 C4orf36Q96KX1 117 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 TXN2Q99757 166 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 ERP44Q9BS26 406 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 RAB33BQ9H082 229 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 ZBP1Q9H171 429 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 SLC25A51Q9H1U9 297 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 RMND5AQ9H871 391 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 CALHM2Q9HA72 323 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 RBM28Q9NW13 759 aaKnown RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 FAM120CQ9NX05 1096 aaKnown RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 NTNG1Q9Y2I2 539 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 GMPPBQ9Y5P6 360 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 DDX49Q9Y6V7 483 aaKnown RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 SRCAPQ6ZRS2 3230 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 MSH6P52701 1360 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 PTPN23Q9H3S7 1636 aa3.22□□□□□ -1.89
PRPF3-204ENST00000470824 CDK12Q9NYV4 1490 aaPredicted RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 XRN1Q8IZH2 1706 aaKnown RBP3.22□□□□□ -1.89
PRPF3-204ENST00000470824 BRWD3Q6RI45 1802 aa3.21□□□□□ -1.89
PRPF3-204ENST00000470824 FGD6Q6ZV73 1430 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 ASXL1Q8IXJ9 1541 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PPIAL4CA0A0B4J2A2 164 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 GSAPA4D1B5 854 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 ZSCAN5CA6NGD5 496 aaPredicted RBP3.21□□□□□ -1.9
PRPF3-204ENST00000470824 H0YCG3 227 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PI15O43692 258 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 GMFGO60234 142 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 STX11O75558 287 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PRAMEF12O95522 483 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 IGHG3P01860 377 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 SERPINB2P05120 415 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PPIAL4GP0DN37 164 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 CLUP10909 449 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PRG2P13727 222 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 SDC1P18827 310 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 ATP6V1C1P21283 382 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 OTX2P32243 289 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 NTHL1P78549 312 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PDK4Q16654 411 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PPP1R3AQ16821 1122 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 MICAQ29983 383 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 ATAD3BQ5T9A4 648 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 PARGQ86W56 976 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 HIPK1Q86Z02 1210 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 SLC22A18ASQ8N1D0 253 aa3.21□□□□□ -1.9
PRPF3-204ENST00000470824 ZNF671Q8TAW3 534 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms