RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ZNF574Q6ZN55 896 aaPredicted RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SLC29A4Q7RTT9 530 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 GDF7Q7Z4P5 450 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PPP1R3BQ86XI6 285 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 CLIP4Q8N3C7 705 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF614Q8N883 585 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF540Q8NDQ6 660 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PLPP5Q8NEB5 264 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 WDR36Q8NI36 951 aaKnown RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF420Q8TAQ5 688 aaPredicted RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SLC2A12Q8TD20 617 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 DOK4Q8TEW6 326 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 TRUB1Q8WWH5 349 aaKnown RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 FCGR1BQ92637 280 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 TSLPQ969D9 159 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 MYDGFQ969H8 173 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 CLIP3Q96DZ5 547 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 Q96MT0 163 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 OR6C1Q96RD1 312 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 WFDC6Q9BQY6 131 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 TRIM2Q9C040 744 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 YIPF3Q9GZM5 350 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 TMEM27Q9HBJ8 222 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SLC25A19Q9HC21 320 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 FSCN3Q9NQT6 498 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 RASSF1Q9NS23 344 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SEMA4GQ9NTN9 838 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 CLN6Q9NWW5 311 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SIDT1Q9NXL6 827 aaKnown RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 PTTG2Q9NZH5 202 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 RSL24D1Q9UHA3 163 aaKnown RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 SLC35A3Q9Y2D2 325 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 GPR55Q9Y2T6 319 aaPredicted RBP8.65□□□□□ -1.02
SMC1A-205ENST00000469129 CHST2Q9Y4C5 530 aa8.65□□□□□ -1.02
SMC1A-205ENST00000469129 A0A087WUU8 490 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 NPIPA5A0A0B4J1W7 369 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 NPIPA7E9PJI5 369 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 KHNYNO15037 678 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CHP2O43745 196 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 XPNPEP2O43895 674 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 TPST2O60704 377 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CPNE3O75131 537 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 WBP4O75554 376 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CLPSP04118 112 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 NPIPA8P0DM63 369 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CT45A8P0DMV1 189 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CT45A9P0DMV2 189 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 ENDOUP21128 410 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 DRD5P21918 477 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 MMP11P24347 488 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 POU1F1P28069 291 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 EPHA2P29317 976 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 STAT5AP42229 794 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 GSSP48637 474 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 ZNF136P52737 540 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 SMSP52788 366 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 SLC37A1P57057 533 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 SNRPGP62308 76 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 DCDP81605 110 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 IL11RAQ14626 422 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 NSDHLQ15738 373 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 NEDD8Q15843 81 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 MAPK14Q16539 360 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 TMEM44Q2T9K0 475 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CT45A2Q5DJT8 189 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 C1orf189Q5VU69 101 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 C12orf73Q69YU5 71 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 LAIR2Q6ISS4 152 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 RPL13AP3Q6NVV1 102 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 ZC3H14Q6PJT7 736 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 RASSF6Q6ZTQ3 369 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 PTCHD4Q6ZW05 846 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 MBOAT2Q6ZWT7 520 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 PRSS48Q7RTY5 328 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 TMPRSS9Q7Z410 1059 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CCDC71Q8IV32 467 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CDK20Q8IZL9 346 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 RNF113BQ8IZP6 322 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 SPARTQ8N0X7 666 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 SHISA5Q8N114 240 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CLDN22Q8N7P3 220 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 BCORP1Q8N888 145 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 AGBL5Q8NDL9 886 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 RHOXF1Q8NHV9 184 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 PTPMT1Q8WUK0 201 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 APH1BQ8WW43 257 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 ZG16BQ96DA0 208 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 SENP5Q96HI0 755 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 MPP4Q96JB8 637 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 LCORQ96JN0 433 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 HS6ST2Q96MM7 605 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CCNL2Q96S94 520 aaPredicted RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 OR8D2Q9GZM6 311 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 VN1R1Q9GZP7 353 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CCDC90BQ9GZT6 254 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 DUSP21Q9H596 190 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CTPS2Q9NRF8 586 aa8.64□□□□□ -1.03
SMC1A-205ENST00000469129 DNAJB12Q9NXW2 375 aaKnown RBP8.64□□□□□ -1.03
SMC1A-205ENST00000469129 CNOT2Q9NZN8 540 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms