RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 FAM74A7A6NL05 159 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ZAR1LA6NP61 321 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TRDCB7Z8K6 153 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TISP43B9A030 160 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 WASH3PC4AMC7 463 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 LRRN3E7EW58 273 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 NPIPB8E9PQR5 432 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 MKRN2OSH3BPM6 223 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SMLR1H3BR10 107 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 M0QYV0 167 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SUV39H1O43463 412 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 FRS3O43559 492 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 PSPNO60542 156 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CIDEAO60543 219 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 FKTNO75072 461 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CSO75390 466 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 KHDRBS3O75525 346 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TUSC2O75896 110 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 DDNO94850 711 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OR2F2O95006 317 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 AK1P00568 194 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ADAP00813 363 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OPN1LWP04000 364 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SERPIND1P05546 499 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 URODP06132 367 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 GP1BAP07359 652 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 LINC00032P0C843 101 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 HKR1P10072 659 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SRFP11831 508 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 IL2RBP14784 551 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CD1DP15813 335 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 HIST1H1BP16401 226 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ABOP16442 354 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TPH1P17752 444 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 RCC1P18754 421 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 PSMB1P20618 241 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 FPR3P25089 353 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ABCD3P28288 659 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ICAM3P32942 547 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 FAUP35544 74 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 AVPR1AP37288 418 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SLC1A2P43004 574 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CRKLP46109 303 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 IDH2P48735 452 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 LHX1P48742 406 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 RPL34P49207 117 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ANXA11P50995 505 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 GZMMP51124 257 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 XKP51811 444 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 PLK1P53350 603 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ATXN1P54253 815 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 EPHB3P54753 998 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 DIO3P55073 304 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 MTPNP58546 118 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CRADDP78560 199 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 DLK1P80370 383 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 IL10RBQ08334 325 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SCAPQ12770 1279 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SNTB2Q13425 540 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OR2F1Q13607 317 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CDH18Q13634 790 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 KIAA0040Q15053 153 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TOMM34Q15785 309 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 VMACQ2NL98 169 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 GXYLT1Q4G148 440 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 FAM74A3Q4VXF1 159 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CARD16Q5EG05 197 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 FAM46CQ5VWP2 391 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 DCAF15Q66K64 600 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 LAIR1Q6GTX8 287 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 RAET1GQ6H3X3 334 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OR5M10Q6IEU7 315 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 MRNIPQ6NTE8 343 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TAPT1Q6NXT6 567 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CASP12Q6UXS9 341 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 NPSR1Q6W5P4 371 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 USP30Q70CQ3 517 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 HIST2H3AQ71DI3 136 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 IQCHQ86VS3 1027 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 MFSD6LQ8IWD5 586 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 HS3ST5Q8IZT8 346 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 STK40Q8N2I9 435 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TRAM1L1Q8N609 369 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 NAT16Q8N8M0 369 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 PTGR2Q8N8N7 351 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 RASGEF1AQ8N9B8 481 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 BPIFCQ8NFQ6 507 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 DBF4BQ8NFT6 615 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OR2L5Q8NG80 312 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OR10G2Q8NGC3 310 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OR1J4Q8NGS1 313 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OR13C3Q8NGS6 347 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 GPR150Q8NGU9 434 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OR10K1Q8NGX5 313 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ADAMTS18Q8TE60 1221 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 RNF141Q8WVD5 230 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TFAP2BQ92481 460 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CNOT9Q92600 299 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 MRPS31Q92665 395 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 C3orf49Q96BT1 292 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms