RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 CRHP06850 196 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 RPL3P39023 403 aaKnown RBP19.62■□□□□ 0.73
TTC28-204ENST00000468807 MAP3K8P41279 467 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 PRIM2P49643 509 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 PPP2R2AP63151 447 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 KEAP1Q14145 624 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 PTGR1Q14914 329 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 ZAR1Q86SH2 424 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 FNDC5Q8NAU1 212 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 HOXB13Q92826 284 aaPredicted RBP19.62■□□□□ 0.73
TTC28-204ENST00000468807 STARD4Q96DR4 205 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 FAM120BQ96EK7 910 aaKnown RBP19.62■□□□□ 0.73
TTC28-204ENST00000468807 SH3YL1Q96HL8 342 aaPredicted RBP19.62■□□□□ 0.73
TTC28-204ENST00000468807 ROPN1BQ9BZX4 212 aaPredicted RBP19.62■□□□□ 0.73
TTC28-204ENST00000468807 OPN3Q9H1Y3 402 aaPredicted RBP19.62■□□□□ 0.73
TTC28-204ENST00000468807 ROPN1Q9HAT0 212 aaPredicted RBP19.62■□□□□ 0.73
TTC28-204ENST00000468807 NTMQ9P121 344 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 AP4B1Q9Y6B7 739 aa19.62■□□□□ 0.73
TTC28-204ENST00000468807 IGLV3-32A0A0A0MS00 114 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 A0A1W2PRB8 838 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 ALG1L2C9J202 215 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 SCDO00767 359 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 EIF1AYO14602 144 aaKnown RBP19.61■□□□□ 0.73
TTC28-204ENST00000468807 RAF1P04049 648 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 LAMP1P11279 417 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 CREB1P16220 341 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 EIF1AXP47813 144 aaKnown RBP19.61■□□□□ 0.73
TTC28-204ENST00000468807 KCNJ5P48544 419 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 FAM27E3Q08E93 113 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 LASP1Q14847 261 aaKnown RBP19.61■□□□□ 0.73
TTC28-204ENST00000468807 SPDYE7PQ495Y7 208 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 GLYR1Q49A26 553 aaPredicted RBP19.61■□□□□ 0.73
TTC28-204ENST00000468807 BTLAQ7Z6A9 289 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 OR6Y1Q8NGX8 325 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 PPP1R14CQ8TAE6 165 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 C3orf30Q96M34 536 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 PRRG4Q9BZD6 226 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 CXXC4Q9H2H0 198 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 FBXO34Q9NWN3 711 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 STOML1Q9UBI4 398 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 ATP6V1HQ9UI12 483 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 ZDHHC2Q9UIJ5 367 aa19.61■□□□□ 0.73
TTC28-204ENST00000468807 HMGN2P05204 90 aaKnown RBP19.6■□□□□ 0.73
TTC28-204ENST00000468807 CD99P14209 185 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 TBXA2RP21731 343 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 SERPINB5P36952 375 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 KIR2DL2P43627 348 aaPredicted RBP19.6■□□□□ 0.73
TTC28-204ENST00000468807 SERPINB4P48594 390 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 ZNF41P51814 821 aaPredicted RBP19.6■□□□□ 0.73
TTC28-204ENST00000468807 POU6F2P78424 691 aaPredicted RBP19.6■□□□□ 0.73
TTC28-204ENST00000468807 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.6■□□□□ 0.73
TTC28-204ENST00000468807 XKR7Q5GH72 579 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 CPTPQ5TA50 214 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 EMBQ6PCB8 327 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 ZCCHC12Q6PEW1 402 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 AENQ8WTP8 325 aaKnown RBP19.6■□□□□ 0.73
TTC28-204ENST00000468807 CDS1Q92903 461 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 TUBGCP3Q96CW5 907 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 RNF122Q9H9V4 155 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 UBQLN4Q9NRR5 601 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 SIRT3Q9NTG7 399 aaPredicted RBP19.6■□□□□ 0.73
TTC28-204ENST00000468807 GIN1Q9NXP7 522 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.6■□□□□ 0.73
TTC28-204ENST00000468807 EIF3LQ9Y262 564 aaKnown RBP19.6■□□□□ 0.73
TTC28-204ENST00000468807 ZNF175Q9Y473 711 aa19.6■□□□□ 0.73
TTC28-204ENST00000468807 V9GYY5 206 aaPredicted RBP19.6■□□□□ 0.73
TTC28-204ENST00000468807 DIAPH2O60879 1101 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 GOSR1O95249 250 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 OPN1LWP04000 364 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 HRGP04196 525 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 BPGMP07738 259 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 POU2F1P14859 743 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 ZNF17P17021 662 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 ARRB2P32121 409 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 TP53BP2Q13625 1128 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 MLC1Q15049 377 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 C6orf136Q5SQH8 315 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 IL23RQ5VWK5 629 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 TGIF2LYQ8IUE0 185 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 METTL25Q8N6Q8 603 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 FAM110BQ8TC76 370 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 NUDT8Q8WV74 236 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 HHATLQ9HCP6 504 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 ATAD3AQ9NVI7 634 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 KLHL28Q9NXS3 571 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 NUP214P35658 2090 aaPredicted RBP19.59■□□□□ 0.73
TTC28-204ENST00000468807 NF1P21359 2839 aa19.59■□□□□ 0.73
TTC28-204ENST00000468807 A0A087WZY1 265 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 CFLARO15519 480 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 PLGP00747 810 aaPredicted RBP19.58■□□□□ 0.72
TTC28-204ENST00000468807 NGFRP08138 427 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 FCGR2AP12318 317 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 ATP6V1C1P21283 382 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 CD79BP40259 229 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 RNF144AP50876 292 aaPredicted RBP19.58■□□□□ 0.72
TTC28-204ENST00000468807 TMEM44Q2T9K0 475 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 ZNF474Q6S9Z5 364 aaPredicted RBP19.58■□□□□ 0.72
TTC28-204ENST00000468807 CAMKMTQ7Z624 323 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 GGNQ86UU5 652 aa19.58■□□□□ 0.72
TTC28-204ENST00000468807 WDR75Q8IWA0 830 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms