RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 B3GALT1Q9Y5Z6 326 aa17.52■□□□□ 0.4
SMC4-209ENST00000468653 SAGE2PA6NJ88 616 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 ZNF136P52737 540 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 LINC00471Q8N535 108 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 PRSS33Q8NF86 280 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 SLC38A4Q969I6 547 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 GABARAPL3Q9BY60 117 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 WWTR1Q9GZV5 400 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 C19orf25Q9UFG5 118 aaPredicted RBP17.51■□□□□ 0.39
SMC4-209ENST00000468653 GMPPBQ9Y5P6 360 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 NPIPB9F8W1W9 429 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 H3BNH8 94 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 LRP3O75074 770 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 OR5F1O95221 314 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 IL33O95760 270 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 ADAP00813 363 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 CYC1P08574 325 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 PRG2P13727 222 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 ETV5P41161 510 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 CLK3P49761 638 aaKnown RBP17.51■□□□□ 0.39
SMC4-209ENST00000468653 RPS6KA3P51812 740 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 NR0B1P51843 470 aaKnown RBP17.51■□□□□ 0.39
SMC4-209ENST00000468653 UGT2B15P54855 530 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 CLDN6P56747 220 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 KEAP1Q14145 624 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 ZSWIM7Q19AV6 140 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 ZNF691Q5VV52 312 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 PAPD4Q6PIY7 484 aaKnown RBP17.51■□□□□ 0.39
SMC4-209ENST00000468653 CPEB2Q7Z5Q1 589 aaKnown RBP17.51■□□□□ 0.39
SMC4-209ENST00000468653 GALNT6Q8NCL4 622 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 SETD9Q8NE22 299 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 B3GNT7Q8NFL0 401 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 OR4C3Q8NH37 302 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 CNOT9Q92600 299 aaKnown RBP17.51■□□□□ 0.39
SMC4-209ENST00000468653 SLC41A3Q96GZ6 507 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 LPAR4Q99677 370 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 PRRX2Q99811 253 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 NRSN2Q9GZP1 204 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 ANKRD19PQ9H560 264 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 ENOPH1Q9UHY7 261 aa17.51■□□□□ 0.39
SMC4-209ENST00000468653 CSO75390 466 aaKnown RBP17.5■□□□□ 0.39
SMC4-209ENST00000468653 JMJD7P0C870 316 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 HPGDP15428 266 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 EPHA2P29317 976 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 KRT20P35900 424 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 GPR143P51810 404 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 RPP38P78345 283 aaKnown RBP17.5■□□□□ 0.39
SMC4-209ENST00000468653 TARDBPQ13148 414 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMC4-209ENST00000468653 FGFBP1Q14512 234 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 CDCP2Q5VXM1 449 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 OR4K5Q8NGD3 323 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 APOL4Q9BPW4 351 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 MESP1Q9BRJ9 268 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 POLR2J2Q9GZM3 115 aaKnown RBP17.5■□□□□ 0.39
SMC4-209ENST00000468653 HOXD1Q9GZZ0 328 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 POLR2J3Q9H1A7 115 aaKnown RBP17.5■□□□□ 0.39
SMC4-209ENST00000468653 PISDQ9UG56 409 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 TESQ9UGI8 421 aaKnown RBP17.5■□□□□ 0.39
SMC4-209ENST00000468653 PCDHGA1Q9Y5H4 931 aa17.5■□□□□ 0.39
SMC4-209ENST00000468653 COL27A1Q8IZC6 1860 aaPredicted RBP17.5■□□□□ 0.39
SMC4-209ENST00000468653 KIF26BQ2KJY2 2108 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 TEX51A0A1B0GUA7 166 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 CDC14CA4D256 554 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 BCAS1O75363 584 aaPredicted RBP17.49■□□□□ 0.39
SMC4-209ENST00000468653 REM1O75628 298 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 MT-CO3P00414 261 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 IL5RAQ01344 420 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 RAPSNQ13702 412 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 PGBD2Q6P3X8 592 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 TMEM205Q6UW68 189 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 FAM198BQ6UWH4 519 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 RRM2BQ7LG56 351 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 GDF7Q7Z4P5 450 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 GRAMD2AQ8IUY3 354 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 CMIPQ8IY22 773 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 PRR22Q8IZ63 422 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 PARP8Q8N3A8 854 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 ZNF527Q8NB42 609 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 NFAM1Q8NET5 270 aaPredicted RBP17.49■□□□□ 0.39
SMC4-209ENST00000468653 LIN37Q96GY3 246 aaPredicted RBP17.49■□□□□ 0.39
SMC4-209ENST00000468653 TAAR9Q96RI9 348 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 ZPBPQ9BS86 351 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 UCK2Q9BZX2 261 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 UBQLN4Q9NRR5 601 aa17.49■□□□□ 0.39
SMC4-209ENST00000468653 NDRG4Q9ULP0 352 aaKnown RBP17.49■□□□□ 0.39
SMC4-209ENST00000468653 TRAPPC13A5PLN9 417 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 SERINC4A6NH21 518 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 TO15178 435 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 FMO6PO60774 539 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 STK17BO94768 372 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 UTS2O95399 124 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 IL12BP29460 328 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 RYKP34925 604 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 OR1Q1Q15612 314 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 KLHL17Q6TDP4 642 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 HSDL2Q6YN16 418 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 ZNF730Q6ZMV8 503 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 HSPBAP1Q96EW2 488 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 ADOQ96SZ5 270 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 ZNF559Q9BR84 538 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms