RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 RNF115Q9Y4L5 304 aa11.67□□□□□ -0.54
PTPN7-207ENST00000468385 TIMM22Q9Y584 194 aa11.67□□□□□ -0.54
PTPN7-207ENST00000468385 MAGED1Q9Y5V3 778 aaPredicted RBP11.67□□□□□ -0.54
PTPN7-207ENST00000468385 CR1P17927 2039 aa11.67□□□□□ -0.54
PTPN7-207ENST00000468385 SONP18583 2426 aaKnown RBP11.67□□□□□ -0.54
PTPN7-207ENST00000468385 A0A087WZY1 265 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 A0A0J9YW62 118 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 ALG1L2C9J202 215 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 TNFSF11O14788 317 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 TLX2O43763 284 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-207ENST00000468385 CD5LO43866 347 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 DLX3O60479 287 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 GCM2O75603 506 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-207ENST00000468385 SYNGR4O95473 234 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 THBS1P07996 1170 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 GABRA3P34903 492 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 ACVR1BP36896 505 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 RAC1P63000 192 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 TSC22D1Q15714 1073 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 NCMAPQ5T1S8 102 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 ALKBH2Q6NS38 261 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 PODNL1Q6PEZ8 512 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 DNM1P46Q6ZS02 220 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 ESPNLQ6ZVH7 1005 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 STK32CQ86UX6 486 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 HIPK1Q86Z02 1210 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 STEAP2Q8NFT2 490 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 POC1BQ8TC44 478 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 PIK3R3Q92569 461 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 SLC9A6Q92581 669 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 HOXB13Q92826 284 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-207ENST00000468385 NEUROG1Q92886 237 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 FBXW5Q969U6 566 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 TRMT61AQ96FX7 289 aaKnown RBP11.66□□□□□ -0.54
PTPN7-207ENST00000468385 AMDHD1Q96NU7 426 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 TACO1Q9BSH4 297 aaKnown RBP11.66□□□□□ -0.54
PTPN7-207ENST00000468385 SLCO5A1Q9H2Y9 848 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 C3orf14Q9HBI5 128 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 TMEM216Q9P0N5 145 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 ZNF180Q9UJW8 692 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 STAB1Q9NY15 2570 aa11.66□□□□□ -0.54
PTPN7-207ENST00000468385 A0A1W2PRB8 838 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 C7orf72A4D263 438 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 POC1B-GALNT4F8VUJ3 575 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 CLOCKO15516 846 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 KCNH1O95259 989 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 OXSR1O95747 527 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-207ENST00000468385 IGHV4-39P01824 125 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 TP53P04637 393 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-207ENST00000468385 ENO1P06733 434 aaKnown RBP11.65□□□□□ -0.54
PTPN7-207ENST00000468385 TUBBP07437 444 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 IFI6P09912 130 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 TAC1P20366 129 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 IMPDH1P20839 514 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 NTSP30990 170 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 MAP3K8P41279 467 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 PLPPR5Q32ZL2 321 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 CPTPQ5TA50 214 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 TFAP2EQ6VUC0 442 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 ATG4DQ86TL0 474 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-207ENST00000468385 EXOC3L1Q86VI1 746 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 GABRG1Q8N1C3 465 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 OR4C3Q8NH37 302 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 SMAP2Q8WU79 429 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-207ENST00000468385 ZBTB8AQ96BR9 441 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 RNF145Q96MT1 663 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 KLHDC3Q9BQ90 382 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 TMEM185BQ9H7F4 350 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 MYNNQ9NPC7 610 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 MIEF1Q9NQG6 463 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 MED17Q9NVC6 651 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 FBXO34Q9NWN3 711 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 LIPT1Q9Y234 373 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 POLR3HQ9Y535 204 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-207ENST00000468385 ANK2Q01484 3957 aa11.65□□□□□ -0.54
PTPN7-207ENST00000468385 SVEP1Q4LDE5 3571 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 TTC36A6NLP5 189 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 ESPNB1AK53 854 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 NDUFB5O43674 189 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 NDUFS7O75251 213 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 NKX2-2O95096 273 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 NTN1O95631 604 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 IFNA2P01563 188 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 CD3EP07766 207 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 ATP5F1P24539 256 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-207ENST00000468385 PRKAA2P54646 552 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 FOXA1P55317 472 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 PKNOX1P55347 436 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 SLC18A2Q05940 514 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 LCP2Q13094 533 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 SLC29A2Q14542 456 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 TAB1Q15750 504 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 PGGHGQ32M88 737 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 ZNF672Q499Z4 452 aaPredicted RBP11.64□□□□□ -0.55
PTPN7-207ENST00000468385 GLE1Q53GS7 698 aaKnown RBP11.64□□□□□ -0.55
PTPN7-207ENST00000468385 SPDYAQ5MJ70 313 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 SFRP5Q5T4F7 317 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 HBMQ6B0K9 141 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 GTF2IRD2BQ6EKJ0 949 aa11.64□□□□□ -0.55
PTPN7-207ENST00000468385 C8orf74Q6P047 294 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms