RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 SENP5Q96HI0 755 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-208ENST00000468300 LMF1Q96S06 567 aa7.65□□□□□ -1.18
BRCA1-208ENST00000468300 SPSB2Q99619 263 aa7.65□□□□□ -1.18
BRCA1-208ENST00000468300 ARHGDIGQ99819 225 aa7.65□□□□□ -1.18
BRCA1-208ENST00000468300 SPRY4Q9C004 299 aa7.65□□□□□ -1.18
BRCA1-208ENST00000468300 SLC26A1Q9H2B4 701 aa7.65□□□□□ -1.18
BRCA1-208ENST00000468300 RYDENQ9NUL5 291 aaKnown RBP7.65□□□□□ -1.18
BRCA1-208ENST00000468300 USE1Q9NZ43 259 aa7.65□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF223Q9UK11 482 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-208ENST00000468300 RAB26Q9ULW5 256 aa7.65□□□□□ -1.18
BRCA1-208ENST00000468300 ZNF292O60281 2723 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 DUXAA6NLW8 204 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 SNTNA6NMZ2 147 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 C4orf47A7E2U8 309 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 C5orf58C9J3I9 102 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 M0R3H8 397 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 ST8SIA5O15466 376 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 BRINP1O60477 761 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 DKK1O94907 266 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 SNAP29O95721 258 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 THY1P04216 161 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 GNAO1P09471 354 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 HSMCR30P0CW71 290 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF23P17027 643 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 ITIH1P19827 911 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 RRM2P31350 389 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 GABRA3P34903 492 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 CARD18P57730 90 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 ADARB1P78563 741 aaKnown RBP7.65□□□□□ -1.19
BRCA1-208ENST00000468300 SLC36A3Q495N2 470 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 CLVS2Q5SYC1 327 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 OVCH1Q7RTY7 1134 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 CARM1Q86X55 608 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 DTX3Q8N9I9 347 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 GATA6Q92908 595 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 DACT3Q96B18 629 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF578Q96N58 590 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-208ENST00000468300 EPYCQ99645 322 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 WDR77Q9BQA1 342 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-208ENST00000468300 CHCHD6Q9BRQ6 235 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 SOX17Q9H6I2 414 aaPredicted RBP7.65□□□□□ -1.19
BRCA1-208ENST00000468300 TMEM9BQ9NQ34 198 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 MAN2C1Q9NTJ4 1040 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 RLIMQ9NVW2 624 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 A4GNTQ9UNA3 340 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 AP4B1Q9Y6B7 739 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 ENPP4Q9Y6X5 453 aa7.65□□□□□ -1.19
BRCA1-208ENST00000468300 TEX51A0A1B0GUA7 166 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 AGAP5A6NIR3 686 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 NPIPB9F8W1W9 429 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 PEX12O00623 359 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 UGT2B17O75795 530 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 GUSBP08236 651 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ALDH3A2P51648 485 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 PGDP52209 483 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 MAPK10P53779 464 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 DCDP81605 110 aaKnown RBP7.64□□□□□ -1.19
BRCA1-208ENST00000468300 BIKQ13323 160 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 SF3B4Q15427 424 aaKnown RBP eCLIP7.64□□□□□ -1.192e-6■■■□□ 15.1
BRCA1-208ENST00000468300 AARDQ4LEZ3 155 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF770Q6IQ21 691 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-208ENST00000468300 FAHD1Q6P587 224 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 UGT2A3Q6UWM9 527 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 USP51Q70EK9 711 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 GALNTL5Q7Z4T8 443 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 SLCO6A1Q86UG4 719 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 CLVS1Q8IUQ0 354 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-208ENST00000468300 C9orf40Q8IXQ3 194 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 SVOPLQ8N434 492 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 AGBL5Q8NDL9 886 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 NFAM1Q8NET5 270 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-208ENST00000468300 OR6T1Q8NGN1 323 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 SPPL2AQ8TCT8 520 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 SLC2A12Q8TD20 617 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 MAGEE2Q8TD90 523 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF607Q96SK3 696 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 AIFM2Q9BRQ8 373 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 NUDT9Q9BW91 350 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 PRR14Q9BWN1 585 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ITPAQ9BY32 194 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 LRCH1Q9Y2L9 728 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 OTOGLQ3ZCN5 2332 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 NPIPA5A0A0B4J1W7 369 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 OR6C65A6NJZ3 312 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 NPIPA7E9PJI5 369 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ADAM11O75078 769 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 PDE9AO76083 593 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 IFNA14P01570 189 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ALOX5P09917 674 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 NPIPA8P0DM63 369 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ADH7P40394 386 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 NBL1P41271 181 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 DAG1Q14118 895 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 OTUD3Q5T2D3 398 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-208ENST00000468300 KDM4DQ6B0I6 523 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 FAM199XQ6PEV8 388 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-208ENST00000468300 FIGNL1Q6PIW4 674 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 DHRS4L2Q6PKH6 230 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 ZNF836Q6ZNA1 936 aa7.64□□□□□ -1.19
BRCA1-208ENST00000468300 RBM44Q6ZP01 1051 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms