RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 ANKRD20A2Q5SQ80 823 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ANKRD20A1Q5TYW2 823 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ANKRD20A3Q5VUR7 823 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 LIPNQ5VXI9 398 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 PTRHD1Q6GMV3 140 aaKnown RBP3.71□□□□□ -1.82
SSR3-204ENST00000467733 ALKBH5Q6P6C2 394 aaKnown RBP3.71□□□□□ -1.82
SSR3-204ENST00000467733 OPN5Q6U736 354 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 C16orf89Q6UX73 402 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 MFSD7Q6UXD7 560 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 C12orf54Q6X4T0 127 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 HSDL2Q6YN16 418 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ZNF704Q6ZNC4 412 aaPredicted RBP3.71□□□□□ -1.82
SSR3-204ENST00000467733 DNM1P46Q6ZS02 220 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ZNF611Q8N823 705 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 PPFIBP2Q8ND30 876 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ZNF740Q8NDX6 193 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 OR13J1Q8NGT2 312 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 SGMS2Q8NHU3 365 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 MPLKIPQ8TAP9 179 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 SLC13A3Q8WWT9 602 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 HAUS1Q96CS2 278 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ZNF597Q96LX8 424 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 WFIKKN1Q96NZ8 548 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 PRAP1Q96NZ9 151 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 TMEM120AQ9BXJ8 343 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ANGPTL4Q9BY76 406 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 SHARPINQ9H0F6 387 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 SLCO5A1Q9H2Y9 848 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ESRP2Q9H6T0 727 aaKnown RBP3.71□□□□□ -1.82
SSR3-204ENST00000467733 LIN28AQ9H9Z2 209 aaKnown RBP3.71□□□□□ -1.82
SSR3-204ENST00000467733 CLK4Q9HAZ1 481 aaKnown RBP3.71□□□□□ -1.82
SSR3-204ENST00000467733 SH2D2AQ9NP31 389 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 ADAP2Q9NPF8 381 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 OBP2BQ9NPH6 170 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 PAPOLBQ9NRJ5 636 aaKnown RBP3.71□□□□□ -1.82
SSR3-204ENST00000467733 KLHL28Q9NXS3 571 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 NENFQ9UMX5 172 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 CAMK2AQ9UQM7 478 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 MMACHCQ9Y4U1 282 aa3.71□□□□□ -1.82
SSR3-204ENST00000467733 BZW2Q9Y6E2 419 aaKnown RBP3.71□□□□□ -1.82
SSR3-204ENST00000467733 hCG_1818297A0A087WSY0 165 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 SYNDIG1LA6NDD5 238 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 AQP12BA6NM10 295 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 A8MXE2 369 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 H7C0C1 242 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 APOC4-APOC2K7ER74 178 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 NDUFS4O43181 175 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 PSTPIP1O43586 416 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 CEP104O60308 925 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 RCBTB2O95199 551 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 APOC2P02655 101 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 H2AFZP0C0S5 128 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 PSG1P11464 419 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 RPS3P23396 243 aaKnown RBP eCLIP3.7□□□□□ -1.821e-8■■■□□ 15
SSR3-204ENST00000467733 CTNNA2P26232 953 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 GDF1P27539 372 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 SERPINB3P29508 390 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 PPP2R1BP30154 601 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 ACVR1BP36896 505 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 CD79BP40259 229 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 ATP5OP48047 213 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 SOX2P48431 317 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 TTPAP49638 278 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 TBPL1P62380 186 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 RPS4XP62701 263 aaKnown RBP3.7□□□□□ -1.82
SSR3-204ENST00000467733 VLDLRP98155 873 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 MYL5Q02045 173 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 ACVR1Q04771 509 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 SF3A3Q12874 501 aaKnown RBP eCLIP3.7□□□□□ -1.82
SSR3-204ENST00000467733 RPS6KA1Q15418 735 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 PHKG1Q16816 387 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 TBRG1Q3YBR2 411 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 FASTKD1Q53R41 847 aaKnown RBP3.7□□□□□ -1.82
SSR3-204ENST00000467733 BEX5Q5H9J7 111 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 NHSL2Q5HYW2 709 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 DCST1Q5T197 706 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 PRAMEF20Q5VT98 475 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 SLC22A10Q63ZE4 541 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 CAPN13Q6MZZ7 669 aaPredicted RBP3.7□□□□□ -1.82
SSR3-204ENST00000467733 H2AFVQ71UI9 128 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 ZNF534Q76KX8 674 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 LDB1Q86U70 411 aaPredicted RBP3.7□□□□□ -1.82
SSR3-204ENST00000467733 LRRC6Q86X45 466 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 CCDC50Q8IVM0 306 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 CDKL3Q8IVW4 592 aaPredicted RBP3.7□□□□□ -1.82
SSR3-204ENST00000467733 OR4L1Q8NH43 312 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 OR8K3Q8NH51 312 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 SLC22A8Q8TCC7 542 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 ZPLD1Q8TCW7 415 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 PAQR8Q8TEZ7 354 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 CTNNBL1Q8WYA6 563 aaPredicted RBP3.7□□□□□ -1.82
SSR3-204ENST00000467733 UCN3Q969E3 161 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 ANKRD9Q96BM1 317 aaPredicted RBP3.7□□□□□ -1.82
SSR3-204ENST00000467733 SPACA9Q96E40 222 aaPredicted RBP3.7□□□□□ -1.82
SSR3-204ENST00000467733 ART5Q96L15 291 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 QRFPRQ96P65 431 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 GPR78Q96P69 363 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 PKP4Q99569 1192 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 UGT2B28Q9BY64 529 aa3.7□□□□□ -1.82
SSR3-204ENST00000467733 PCBD2Q9H0N5 130 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms