RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	SEC14L3	Q9UDX4	400 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	ZNF223	Q9UK11	482 aa	Predicted RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	MRTO4	Q9UKD2	239 aa	Known RBP	11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	BAG5	Q9UL15	447 aa		11.1	□□□□□ -0.63
CTNS-205	ENST00000467663	TRBV11-1	A0A0K0K1C0	115 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	NME2P1	O60361	137 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	WISP2	O76076	250 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	CT62	P0C5K7	136 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	NCK1	P16333	377 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	NME2	P22392	152 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	SOX18	P35713	384 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	CYB561	P49447	251 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	HLCS	P50747	726 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	SELENOW	P63302	87 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	MRPS22	P82650	360 aa	Known RBP	11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	SLC34A1	Q06495	639 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	RCN1	Q15293	331 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	C1QL3	Q5VWW1	255 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	RNF111	Q6ZNA4	994 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	C16orf62	Q7Z3J2	963 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	GALNTL5	Q7Z4T8	443 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	ARMC8	Q8IUR7	673 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	ADGRG5	Q8IZF4	528 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	C10orf111	Q8N326	155 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	ZNF615	Q8N8J6	731 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	OR52R1	Q8NGF1	315 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	OR8K3	Q8NH51	312 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	NFKBID	Q8NI38	313 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	THAP3	Q8WTV1	239 aa	Predicted RBP	11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	PTPMT1	Q8WUK0	201 aa	Predicted RBP	11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	PPWD1	Q96BP3	646 aa	Known RBP	11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	VMP1	Q96GC9	406 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	TMEM19	Q96HH6	336 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	SENP5	Q96HI0	755 aa	Predicted RBP	11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	FRMD6	Q96NE9	622 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	DOHH	Q9BU89	302 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	VCX3B	Q9H321	246 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663		Q9N2J8	555 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	C8orf4	Q9NR00	106 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	IFT52	Q9Y366	437 aa		11.09	□□□□□ -0.63
CTNS-205	ENST00000467663	NIN	Q8N4C6	2090 aa		11.08	□□□□□ -0.63
CTNS-205	ENST00000467663	STX11	O75558	287 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SLC25A12	O75746	678 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	KRT36	O76013	467 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SERPINA1	P01009	418 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	IGKV3-11	P04433	115 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	BCHE	P06276	602 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	NUDT7	P0C024	238 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	ANPEP	P15144	967 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	ITGA2	P17301	1181 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	DRD5	P21918	477 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	FAS	P25445	335 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	PPIC	P45877	212 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	EMD	P50402	254 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	PSMD4	P55036	377 aa	Known RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SLC37A1	P57057	533 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	POU6F2	P78424	691 aa	Predicted RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	ALDH6A1	Q02252	535 aa	Known RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	ZNF155	Q12901	538 aa	Predicted RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	GK3P	Q14409	553 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	CYP27C1	Q4G0S4	372 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	KRTCAP3	Q53RY4	240 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	TBCEL	Q5QJ74	424 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	FJX1	Q86VR8	437 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	PQLC1	Q8N2U9	271 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	COX18	Q8N8Q8	333 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	FAM98A	Q8NCA5	519 aa	Known RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SLC16A11	Q8NCK7	471 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	CANT1	Q8WVQ1	401 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	PYDC1	Q8WXC3	89 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SLC9A6	Q92581	669 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	TP53INP1	Q96A56	240 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SLC35A4	Q96G79	324 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	VSTM2L	Q96N03	204 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	GPR137	Q96N19	417 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	BTBD9	Q96Q07	612 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	TREX2	Q9BQ50	279 aa	Predicted RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	G6PC3	Q9BUM1	346 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	CNPPD1	Q9BV87	410 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SAP130	Q9H0E3	1048 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SERHL2	Q9H4I8	314 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	ARMC7	Q9H6L4	198 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	FOLH1B	Q9HBA9	442 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	GMPR2	Q9P2T1	348 aa	Known RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	USP22	Q9UPT9	525 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	AURKC	Q9UQB9	309 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	ERVK-19	Q9WJR5	959 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	GPC6	Q9Y625	555 aa	Predicted RBP	11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	DSPP	Q9NZW4	1301 aa		11.08	□□□□□ -0.64
CTNS-205	ENST00000467663	SVIL	O95425	2214 aa		11.07	□□□□□ -0.64
CTNS-205	ENST00000467663	TMEM200C	A6NKL6	621 aa		11.07	□□□□□ -0.64
CTNS-205	ENST00000467663		A8MVJ9	347 aa		11.07	□□□□□ -0.64
CTNS-205	ENST00000467663		H3BNX3	289 aa		11.07	□□□□□ -0.64
CTNS-205	ENST00000467663		M0QX08	132 aa		11.07	□□□□□ -0.64
CTNS-205	ENST00000467663	ACOX3	O15254	700 aa		11.07	□□□□□ -0.64
CTNS-205	ENST00000467663	ZG16	O60844	167 aa		11.07	□□□□□ -0.64
CTNS-205	ENST00000467663	DEAF1	O75398	565 aa	Predicted RBP	11.07	□□□□□ -0.64

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