RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 KCTD14Q9BQ13 255 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-205ENST00000466897 FAM173AQ9BQD7 235 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 SPATA5L1Q9BVQ7 753 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 OSBPL11Q9BXB4 747 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 TBL1XR1Q9BZK7 514 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 LRMDAQ9H2I8 198 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 FLRT3Q9NZU0 649 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 KCNE5Q9UJ90 142 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 IFT52Q9Y366 437 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 DTNAQ9Y4J8 743 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 WIF1Q9Y5W5 379 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 GPC6Q9Y625 555 aaPredicted RBP13.91□□□□□ -0.18
NPHP4-205ENST00000466897 NBEAQ8NFP9 2946 aa13.91□□□□□ -0.18
NPHP4-205ENST00000466897 TRIM3O75382 744 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-205ENST00000466897 NID1P14543 1247 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 ST13P50502 369 aaKnown RBP13.9□□□□□ -0.18
NPHP4-205ENST00000466897 FGFBP1Q14512 234 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 FNDC7Q5VTL7 733 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 SLC6A19Q695T7 634 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 PATL1Q86TB9 770 aaKnown RBP13.9□□□□□ -0.18
NPHP4-205ENST00000466897 IFNEQ86WN2 208 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 PTRH1Q86Y79 214 aaKnown RBP13.9□□□□□ -0.18
NPHP4-205ENST00000466897 BHLHE22Q8NFJ8 381 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-205ENST00000466897 DOHHQ9BU89 302 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 MMADHCQ9H3L0 296 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-205ENST00000466897 ZNF71Q9NQZ8 489 aaPredicted RBP13.9□□□□□ -0.18
NPHP4-205ENST00000466897 SDHAF3Q9NRP4 125 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 KLRF1Q9NZS2 232 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 BOD1L1Q8NFC6 3051 aa13.9□□□□□ -0.18
NPHP4-205ENST00000466897 BSNQ9UPA5 3926 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 IGLV3-32A0A0A0MS00 114 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 H3BNH8 94 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 ATXN7O15265 892 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 GCM2O75603 506 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 SERPINB7O75635 380 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 DNAJC8O75937 253 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 ELAVL4P26378 380 aaKnown RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 C17orf67Q0P5P2 114 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 BNIP2Q12982 314 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 CEACAM7Q14002 265 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 ELOAQ14241 798 aaKnown RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 MAPK14Q16539 360 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 LIN52Q52LA3 116 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 RPS26P11Q5JNZ5 115 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 PDZK1Q5T2W1 519 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 PRAMEF20Q5VT98 475 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 RNF220Q5VTB9 566 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 APOOLQ6UXV4 268 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 OLIG3Q7RTU3 272 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 GALNTL5Q7Z4T8 443 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 PACS2Q86VP3 889 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 SULF2Q8IWU5 870 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 ZFP62Q8NB50 900 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 FAM98AQ8NCA5 519 aaKnown RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 FAM71CQ8NEG0 241 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 OR2M7Q8NG81 312 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 RASSF5Q8WWW0 418 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 ZG16BQ96DA0 208 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF597Q96LX8 424 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 MUC13Q9H3R2 512 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 PIF1Q9H611 641 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 CACYBPQ9HB71 228 aaKnown RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 DEPPQ9NTK1 212 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 BOKQ9UMX3 212 aaPredicted RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 SLC35A3Q9Y2D2 325 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.89□□□□□ -0.19
NPHP4-205ENST00000466897 HEATR5AQ86XA9 2040 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 NCKAP5O14513 1909 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 CHD6Q8TD26 2715 aa13.89□□□□□ -0.19
NPHP4-205ENST00000466897 PCNX3Q9H6A9 2034 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 NPIPA5A0A0B4J1W7 369 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 CENPVL1A0A0U1RR11 272 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 SERINC4A6NH21 518 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 NPIPA7E9PJI5 369 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 SNPHO15079 494 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 NDUFB5O43674 189 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 PEX1O43933 1283 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 ANGPTL1O95841 491 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 IFNA14P01570 189 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 PABPC4LP0CB38 370 aaKnown RBP13.88□□□□□ -0.19
NPHP4-205ENST00000466897 NPIPA8P0DM63 369 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 IL7RP16871 459 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 GGT1P19440 569 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 PRKAR1BP31321 381 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 KDELR2P33947 212 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 NCALDP61601 193 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 KCNJ2P63252 427 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 FOXO1Q12778 655 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 KLRB1Q12918 225 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 LARS2Q15031 903 aaKnown RBP13.88□□□□□ -0.19
NPHP4-205ENST00000466897 HYAL4Q2M3T9 481 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 BICRALQ6AI39 1079 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 DHRS4L2Q6PKH6 230 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 ASRGL1Q7L266 308 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 GRAMD2AQ8IUY3 354 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 TOR1AIP2Q8NFQ8 470 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 OR52E4Q8NGH9 312 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms