RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SPTBN1Q01082 2364 aaKnown RBP8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 A0A096LPI6 279 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 TRBV5-3A0A0A0MS03 114 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 PRAMEF27A3QJZ7 478 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 C7orf72A4D263 438 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 NPIPA2E9PIF3 369 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 NPIPA3F8WFD2 350 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 HMGN4O00479 90 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 DYNC1I1O14576 645 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 NDUFB5O43674 189 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 DNAJA2O60884 412 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 WDR1O75083 606 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 STX11O75558 287 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 TRAPPC6AO75865 159 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 KRT75O95678 551 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 TPOP07202 933 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 BMP2P12643 396 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 GABRA1P14867 456 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 CPN1P15169 458 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 BMP7P18075 431 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 CAPN3P20807 821 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 ATP6V1C1P21283 382 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 CHMP24386 653 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 ACVR2AP27037 513 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 DPP4P27487 766 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 PTGER4P35408 488 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 CHI3L1P36222 383 aaPredicted RBP8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 DCTP40126 519 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 ADH7P40394 386 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 ZNF141Q15928 474 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 WIPI1Q5MNZ9 446 aaPredicted RBP8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.6□□□□□ -1.033e-7■■■■■ 31.8
SDCCAG3-208ENST00000466579 RTL6Q6ICC9 239 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 OR5M10Q6IEU7 315 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 TNFAIP8L2Q6P589 184 aaPredicted RBP8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 ZNF621Q6ZSS3 439 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 GALNT10Q86SR1 603 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 YRDCQ86U90 279 aaKnown RBP8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 RNF130Q86XS8 419 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 MARVELD2Q8N4S9 558 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 OR4K17Q8NGC6 315 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 DUSP19Q8WTR2 217 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 ITLN2Q8WWU7 325 aaPredicted RBP8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 PMM1Q92871 262 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 VPS33AQ96AX1 596 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 SPDL1Q96EA4 605 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 C1GALT1C1Q96EU7 318 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 TRNT1Q96Q11 434 aaKnown RBP8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 UGT2B28Q9BY64 529 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 DSN1Q9H410 356 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 MRGBPQ9NV56 204 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 FGFR1OP2Q9NVK5 253 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 TAS2R10Q9NYW0 307 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 SUCOQ9UBS9 1254 aaKnown RBP8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 KCNE5Q9UJ90 142 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 TRIM33Q9UPN9 1127 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 LIPT1Q9Y234 373 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 PCDHB14Q9Y5E9 798 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 FAM215AQ9Y5M1 114 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 MED12Q93074 2177 aa8.6□□□□□ -1.03
SDCCAG3-208ENST00000466579 A0A087WZY1 265 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 A0A0G2JND7 137 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 A0A1W2PP18 115 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 FIGNL2A6NMB9 653 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 AHRRA9YTQ3 701 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 LINC01387J3KSC0 135 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 ETV2O00321 342 aaPredicted RBP8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 SCDO00767 359 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 KIAA0513O60268 411 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 FCMRO60667 390 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 ZG16O60844 167 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 GSNP06396 782 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 OR12D1P0DN82 309 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 TROVE2P10155 538 aaKnown RBP eCLIP8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 CD1EP15812 388 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 RFX3P48380 749 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 LHX2P50458 406 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 ANXA11P50995 505 aaKnown RBP8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 MAPK11Q15759 364 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 CD226Q15762 336 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 BCL2A1Q16548 175 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 GTDC1Q4AE62 458 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 FLYWCH1Q4VC44 716 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 AGKQ53H12 422 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 COX20Q5RI15 118 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 DCST1Q5T197 706 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 ATAD3BQ5T9A4 648 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 WLSQ5T9L3 541 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 TMEM211Q6ICI0 200 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 TYW3Q6IPR3 259 aaKnown RBP8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 XKRXQ6PP77 449 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 SLC2A7Q6PXP3 512 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 FRRS1Q6ZNA5 592 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 ADGRE4PQ86SQ3 457 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 IFNEQ86WN2 208 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 MSRB3Q8IXL7 192 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 PM20D2Q8IYS1 436 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 ULK2Q8IYT8 1036 aa8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 ZNF808Q8N4W9 903 aaPredicted RBP8.59□□□□□ -1.03
SDCCAG3-208ENST00000466579 DPP10Q8N608 796 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms