RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 PCDHGB2Q9Y5G2 931 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 NPIPB9F8W1W9 429 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 OR6B1O95007 311 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 PRG2P13727 222 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 FMO3P31513 532 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 IDH2P48735 452 aaKnown RBP19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 PLAURQ03405 335 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 COX10Q12887 443 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 ILKQ13418 452 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 TRA2AQ13595 282 aaKnown RBP eCLIP19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 ZNF141Q15928 474 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 DBX2Q6ZNG2 339 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 GDF7Q7Z4P5 450 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 DEPDC4Q8N2C3 294 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 PLPP5Q8NEB5 264 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 STT3BQ8TCJ2 826 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 ZNF721Q8TF20 911 aa19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 TESQ9UGI8 421 aaKnown RBP19.54■□□□□ 0.72
PPP1R3F-203ENST00000466508 XPNPEP2O43895 674 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 FMO6PO60774 539 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 WBP4O75554 376 aaKnown RBP19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 THY1P04216 161 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 HBQ1P09105 142 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 GKN3PP0CG01 181 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 DRD5P21918 477 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 IFNGR2P38484 337 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 RNF144AP50876 292 aaPredicted RBP19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 LSM11P83369 360 aaKnown RBP eCLIP19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 LAIR1Q6GTX8 287 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 BPHLQ86WA6 291 aaPredicted RBP19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 GRAMD2AQ8IUY3 354 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 NLGN4XQ8N0W4 816 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 ZNF614Q8N883 585 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 APH1BQ8WW43 257 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 ACOT11Q8WXI4 607 aaPredicted RBP19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 ART5Q96L15 291 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 RBM38Q9H0Z9 239 aaKnown RBP19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 OCIAD1Q9NX40 245 aa19.53■□□□□ 0.72
PPP1R3F-203ENST00000466508 LNP1A1A4G5 178 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 POLR1CO15160 346 aaPredicted RBP19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 ABCB7O75027 752 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 BCAS1O75363 584 aaPredicted RBP19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 GP1BAP07359 652 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 ZGLP1P0C6A0 271 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 HTR2AP28223 471 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 HOXD11P31277 338 aaPredicted RBP19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 CSTF2P33240 577 aaKnown RBP eCLIP19.52■□□□□ 0.722e-6■■■□□ 18.2
PPP1R3F-203ENST00000466508 PPICP45877 212 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 PSMD4P55036 377 aaKnown RBP19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 OCA2Q04671 838 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 DECR1Q16698 335 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 BORAQ6PGQ7 559 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 ZNF730Q6ZMV8 503 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 SGCDQ92629 289 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 APMAPQ9HDC9 416 aa19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 PAK1IP1Q9NWT1 392 aaPredicted RBP19.52■□□□□ 0.72
PPP1R3F-203ENST00000466508 TRAPPC13A5PLN9 417 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 SOX14O95416 240 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 LDOC1O95751 146 aaPredicted RBP19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 HTR1AP08908 422 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 POU1F1P28069 291 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 KRT20P35900 424 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 ATP12AP54707 1039 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 CDC42P60953 191 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 DCDP81605 110 aaKnown RBP19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 ZFP36L1Q07352 338 aaKnown RBP19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 IL11RAQ14626 422 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 ZSWIM7Q19AV6 140 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 PLA2G2CQ5R387 149 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 ZNF385CQ66K41 422 aaPredicted RBP19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 RBM44Q6ZP01 1051 aaKnown RBP19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 KCTD8Q6ZWB6 473 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 NKAIN4Q8IVV8 208 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 RHOXF1Q8NHV9 184 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 C14orf105Q9NVL8 296 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 IMPAD1Q9NX62 359 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 SCN3BQ9NY72 215 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 TPRKBQ9Y3C4 175 aa19.52■□□□□ 0.71
PPP1R3F-203ENST00000466508 FLRT2O43155 660 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 GFRA3O60609 400 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 ONECUT2O95948 504 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 FGF5P12034 268 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 GSTM3P21266 225 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 ACP1P24666 158 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 ALDH6A1Q02252 535 aaKnown RBP19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 FGFBP1Q14512 234 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 SMN1Q16637 294 aaKnown RBP19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 TMEM236Q5W0B7 351 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 SHISA6Q6ZSJ9 500 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 RRM2BQ7LG56 351 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 AGBL5Q8NDL9 886 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 CNOT9Q92600 299 aaKnown RBP19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 TMIGD2Q96BF3 282 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 GPA33Q99795 319 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 POLR1BQ9H9Y6 1135 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 SLC7A7Q9UM01 511 aa19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 RIF1Q5UIP0 2472 aaKnown RBP19.51■□□□□ 0.71
PPP1R3F-203ENST00000466508 FRG2CA6NGY1 282 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms