RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 SLC38A1Q9H2H9 487 aa17.26■□□□□ 0.35
LMNB1-204ENST00000463908 RUBCNLQ9H714 662 aa17.26■□□□□ 0.35
LMNB1-204ENST00000463908 NANOGQ9H9S0 305 aa17.26■□□□□ 0.35
LMNB1-204ENST00000463908 PLSCR2Q9NRY7 297 aa17.26■□□□□ 0.35
LMNB1-204ENST00000463908 SEC14L3Q9UDX4 400 aa17.26■□□□□ 0.35
LMNB1-204ENST00000463908 FBXL2Q9UKC9 423 aa17.26■□□□□ 0.35
LMNB1-204ENST00000463908 C15orf41Q9Y2V0 281 aa17.26■□□□□ 0.35
LMNB1-204ENST00000463908 A0A1W2PQD3 144 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 CBR3O75828 277 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 NPPAP01160 153 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 PPIBP23284 216 aaKnown RBP17.25■□□□□ 0.35
LMNB1-204ENST00000463908 ELAVL4P26378 380 aaKnown RBP17.25■□□□□ 0.35
LMNB1-204ENST00000463908 RNF144AP50876 292 aaPredicted RBP17.25■□□□□ 0.35
LMNB1-204ENST00000463908 HSF1Q00613 529 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 C17orf67Q0P5P2 114 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 MRPL49Q13405 166 aaKnown RBP17.25■□□□□ 0.35
LMNB1-204ENST00000463908 ZNF141Q15928 474 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 ADRM1Q16186 407 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 TRMT5Q32P41 509 aaKnown RBP17.25■□□□□ 0.35
LMNB1-204ENST00000463908 GKAP1Q5VSY0 366 aaPredicted RBP17.25■□□□□ 0.35
LMNB1-204ENST00000463908 LRRC74BQ6ZQY2 392 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 FGD2Q7Z6J4 655 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 FAM109AQ8N4B1 249 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 FADS6Q8N9I5 356 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 GATSQ8NAP1 163 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 MAL2Q969L2 176 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 RCN3Q96D15 328 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 DSN1Q9H410 356 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 RAD21L1Q9H4I0 556 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 POLE3Q9NRF9 147 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 SDHAF3Q9NRP4 125 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 MED11Q9P086 117 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 WDR45Q9Y484 360 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 DTNAQ9Y4J8 743 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 LIPGQ9Y5X9 500 aa17.25■□□□□ 0.35
LMNB1-204ENST00000463908 IGLV3-32A0A0A0MS00 114 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 EVPLLA8MZ36 301 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 ACOT7O00154 380 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 SCDO00767 359 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 NDUFB5O43674 189 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 KIAA0513O60268 411 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 IGHG3P01860 377 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 HPNP05981 417 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 NR2F1P10589 423 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 GNLYP22749 145 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 MTPNP58546 118 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 HMGN2P46Q86SG4 172 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 ZNF619Q8N2I2 560 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 OR2M3Q8NG83 312 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 KLHDC3Q9BQ90 382 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 THUMPD3Q9BV44 507 aaKnown RBP17.24■□□□□ 0.35
LMNB1-204ENST00000463908 QRSL1Q9H0R6 528 aaKnown RBP17.24■□□□□ 0.35
LMNB1-204ENST00000463908 MTHFD2LQ9H903 347 aaPredicted RBP17.24■□□□□ 0.35
LMNB1-204ENST00000463908 ACKR4Q9NPB9 350 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 A4GALTQ9NPC4 353 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 THUMPD1Q9NXG2 353 aaKnown RBP17.24■□□□□ 0.35
LMNB1-204ENST00000463908 QPCTLQ9NXS2 382 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 PPP4R1LQ9P1A2 415 aa17.24■□□□□ 0.35
LMNB1-204ENST00000463908 UBR5O95071 2799 aaPredicted RBP17.24■□□□□ 0.35
LMNB1-204ENST00000463908 PRRC2CQ9Y520 2896 aaKnown RBP17.23■□□□□ 0.35
LMNB1-204ENST00000463908 DOPEY2Q9Y3R5 2298 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 ANKUB1A6NFN9 424 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 OIP5O43482 229 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 TRAPPC6AO75865 159 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 HPGDP15428 266 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 GDF1P27539 372 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 UQCRFS1P47985 274 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 GZMMP51124 257 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 PDZK1Q5T2W1 519 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 GFRALQ6UXV0 394 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 TRILQ7L0X0 811 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 FITM2Q8N6M3 262 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 PCYOX1LQ8NBM8 494 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 LRRC37BQ96QE4 947 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 KAT8Q9H7Z6 458 aaKnown RBP17.23■□□□□ 0.35
LMNB1-204ENST00000463908 P2RX2Q9UBL9 471 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 B4GALT7Q9UBV7 327 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 NCKAP5O14513 1909 aa17.23■□□□□ 0.35
LMNB1-204ENST00000463908 A0A1B0GTH9 108 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 A0A1B0GVC2 190 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 AIM2O14862 343 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 ZIC3O60481 467 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 CDC40O60508 579 aaKnown RBP eCLIP17.22■□□□□ 0.35
LMNB1-204ENST00000463908 DCTN3O75935 186 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 BCHEP06276 602 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 PRDX6P30041 224 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 EIPR1Q53HC9 387 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 RABL3Q5HYI8 236 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 GCNT6Q5T4J0 391 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 CBLN3Q6UW01 205 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 ZNF527Q8NB42 609 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 CCDC197Q8NCU1 140 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 PHOSPHO1Q8TCT1 267 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 TMEM19Q96HH6 336 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 TREX2Q9BQ50 279 aaPredicted RBP17.22■□□□□ 0.35
LMNB1-204ENST00000463908 GPATCH1Q9BRR8 931 aaKnown RBP17.22■□□□□ 0.35
LMNB1-204ENST00000463908 RSPO3Q9BXY4 272 aaPredicted RBP17.22■□□□□ 0.35
LMNB1-204ENST00000463908 EFCAB1Q9HAE3 211 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 BCL2L10Q9HD36 194 aa17.22■□□□□ 0.35
LMNB1-204ENST00000463908 ARL8BQ9NVJ2 186 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms