RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 RETREG3Q86VR2 466 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 MSRB3Q8IXL7 192 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 METTL25Q8N6Q8 603 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 WDSUB1Q8N9V3 476 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 PHOSPHO1Q8TCT1 267 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 DUSP19Q8WTR2 217 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 ANKRD27Q96NW4 1050 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 CPPED1Q9BRF8 314 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-204ENST00000463487 CCDC106Q9BWC9 280 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 SAP130Q9H0E3 1048 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 UBQLN3Q9H347 655 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 MKLN1Q9UL63 735 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 CFAP46Q8IYW2 2715 aa18.05■□□□□ 0.48
COL9A3-204ENST00000463487 OR14I1A6ND48 311 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 FBP2O00757 339 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 FCMRO60667 390 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 PDE9AO76083 593 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 HPNP05981 417 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 BCHEP06276 602 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 BMP2P12643 396 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 COX4I1P13073 169 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 GPX2P18283 190 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 GNLYP22749 145 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 SRD5A2P31213 254 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 DSCR4P56555 118 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-204ENST00000463487 MRPL49Q13405 166 aaKnown RBP18.04■□□□□ 0.48
COL9A3-204ENST00000463487 ZNF141Q15928 474 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 SYPL1Q16563 259 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 RUNDC3AQ59EK9 446 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 PRAMEF8Q5VWM4 474 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 PRAMEF7Q5VXH5 474 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 OR5M10Q6IEU7 315 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 PEX5LQ8IYB4 626 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 OR14L1PQ8NHC6 308 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 MYLK2Q9H1R3 596 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 MTHFD2LQ9H903 347 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-204ENST00000463487 A4GALTQ9NPC4 353 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 PLSCR2Q9NRY7 297 aa18.04■□□□□ 0.48
COL9A3-204ENST00000463487 SUCOQ9UBS9 1254 aaKnown RBP18.04■□□□□ 0.48
COL9A3-204ENST00000463487 MRPS18CQ9Y3D5 142 aaKnown RBP18.04■□□□□ 0.48
COL9A3-204ENST00000463487 SVILO95425 2214 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 IGLV3-32A0A0A0MS00 114 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 C15orf38-AP3S2A0A0A6YYH1 394 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 NPIPA5A0A0B4J1W7 369 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 NPIPA7E9PJI5 369 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 NPIPB9F8W1W9 429 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 WISP1O95388 367 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 C1QCP02747 245 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 NPIPA8P0DM63 369 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 UBL4AP11441 157 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 CD1EP15812 388 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 DPP4P27487 766 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 PRDX6P30041 224 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 PTGS2P35354 604 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 FUT5Q11128 374 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 CYP51A1Q16850 503 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 PDZK1Q5T2W1 519 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 AP1ARQ63HQ0 302 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 TYW3Q6IPR3 259 aaKnown RBP18.03■□□□□ 0.48
COL9A3-204ENST00000463487 APOOLQ6UXV4 268 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 FRRS1Q6ZNA5 592 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 TRILQ7L0X0 811 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 EIF3MQ7L2H7 374 aaKnown RBP18.03■□□□□ 0.48
COL9A3-204ENST00000463487 ARPINQ7Z6K5 226 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 EID3Q8N140 333 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 ANKFN1Q8N957 763 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 FADS6Q8N9I5 356 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 GATSQ8NAP1 163 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 CCDC197Q8NCU1 140 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 OR2M3Q8NG83 312 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 NEIL3Q8TAT5 605 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 SLC38A5Q8WUX1 472 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 SARAFQ96BY9 339 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 LRRC58Q96CX6 371 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 DSN1Q9H410 356 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 EFCAB1Q9HAE3 211 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 TAS2R10Q9NYW0 307 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 SLC35A3Q9Y2D2 325 aa18.03■□□□□ 0.48
COL9A3-204ENST00000463487 A0A0G2JPF8 293 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 A0A1B0GTH9 108 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 A0A1B0GVC2 190 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 SERINC4A6NH21 518 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 HNRNPCL2B2RXH8 293 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 HNRNPCL3B7ZW38 293 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 AQP7O14520 342 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 NDUFAB1O14561 156 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 PRRG2O14669 202 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 BCKDKO14874 412 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 HCRTR2O43614 444 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 SLC19A2O60779 497 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 HNRNPCL1O60812 293 aaKnown RBP18.02■□□□□ 0.48
COL9A3-204ENST00000463487 TNFRSF21O75509 655 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 UGT2B17O75795 530 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 CHRM4P08173 479 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 TFPTP0C1Z6 253 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 HNRNPCL4P0DMR1 293 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 ZNF41P51814 821 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-204ENST00000463487 SUMO3P55854 103 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-204ENST00000463487 CHRNEQ04844 493 aa18.02■□□□□ 0.48
COL9A3-204ENST00000463487 ART3Q13508 389 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms