RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 HPGDP15428 266 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 CREB1P16220 341 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 PRPS1L1P21108 318 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 TCEA1P23193 301 aaKnown RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 CPA2P48052 419 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 CCT3P49368 545 aaKnown RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 SUCLG1P53597 346 aaKnown RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 IST1P53990 364 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 CLDN15P56746 228 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 POU6F2P78424 691 aaPredicted RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 EMX2Q04743 252 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 STX5Q13190 355 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 DUSP5Q16690 384 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 TMEM44Q2T9K0 475 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 RAET1LQ5VY80 246 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 MFSD12Q6NUT3 480 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 ZCCHC23Q6ZST2 131 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 MTERF4Q7Z6M4 381 aaKnown RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 CROCCP2Q86T23 111 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 LUZP2Q86TE4 346 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 CDC20BQ86Y33 519 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 RIMKLAQ8IXN7 391 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 KIRREL3Q8IZU9 778 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 FNDC5Q8NAU1 212 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 OR7A2PQ8NGA2 310 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 CLHC1Q8NHS4 586 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 PSMA8Q8TAA3 256 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 PPP1R14CQ8TAE6 165 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 LINC01560Q8TB33 94 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 MOAP1Q96BY2 351 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 TUBGCP3Q96CW5 907 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 STARD4Q96DR4 205 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 FAM120BQ96EK7 910 aaKnown RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 C16orf58Q96GQ5 468 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 C3orf30Q96M34 536 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 MS4A4EQ96PG1 132 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 FOXC2Q99958 501 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 GPATCH1Q9BRR8 931 aaKnown RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 BTBD2Q9BX70 525 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 ACTRT3Q9BYD9 372 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 PARD6BQ9BYG5 372 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 CLEC4MQ9H2X3 399 aaPredicted RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 PIGUQ9H490 435 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 SSU72Q9NP77 194 aaKnown RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 SIRT3Q9NTG7 399 aaPredicted RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 PAQR5Q9NXK6 330 aaPredicted RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 ST6GALNAC2Q9UJ37 374 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 PACSIN3Q9UKS6 424 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 FAF1Q9UNN5 650 aaPredicted RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF175Q9Y473 711 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 VPS13CQ709C8 3753 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF469Q96JG9 3925 aaPredicted RBP6.57□□□□□ -1.36
PTPRF-210ENST00000463041 DSCAMO60469 2012 aa6.57□□□□□ -1.36
PTPRF-210ENST00000463041 NAV3Q8IVL0 2385 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 C7orf72A4D263 438 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 DUXAA6NLW8 204 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 C17orf51A8MQB3 221 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 H3BML4 177 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 SCDO00767 359 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 TM9SF1O15321 606 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 SERPINE1P05121 402 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 HMGN2P05204 90 aaKnown RBP6.56□□□□□ -1.36
PTPRF-210ENST00000463041 MYZAPP0CAP1 466 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF17P17021 662 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 IL11P20809 199 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 DNASE1P24855 282 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 ARRB2P32121 409 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 KIR2DL2P43627 348 aaPredicted RBP6.56□□□□□ -1.36
PTPRF-210ENST00000463041 ART1P52961 327 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 CLDN8P56748 225 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 C21orf58P58505 322 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 ABCE1P61221 599 aaKnown RBP6.56□□□□□ -1.36
PTPRF-210ENST00000463041 RAC1P63000 192 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 TP53BP2Q13625 1128 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 LASP1Q14847 261 aaKnown RBP6.56□□□□□ -1.36
PTPRF-210ENST00000463041 SGCBQ16585 318 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 KRT71Q3SY84 523 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 PDSS1Q5T2R2 415 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 FBXW10Q5XX13 1052 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 GTF2IRD2BQ6EKJ0 949 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 CDC73Q6P1J9 531 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 BHLHB9Q6PI77 547 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 FIGNL1Q6PIW4 674 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 PLXDC2Q6UX71 529 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 SZRD1Q7Z422 152 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 CAMKMTQ7Z624 323 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 BTLAQ7Z6A9 289 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 GTF2IRD2Q86UP8 949 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 WDR75Q8IWA0 830 aaKnown RBP6.56□□□□□ -1.36
PTPRF-210ENST00000463041 UBQLNLQ8IYU4 475 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 GCNT2Q8N0V5 402 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 GTPBP8Q8N3Z3 284 aaPredicted RBP6.56□□□□□ -1.36
PTPRF-210ENST00000463041 METTL25Q8N6Q8 603 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 COX18Q8N8Q8 333 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 ZNF527Q8NB42 609 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 OR56A1Q8NGH5 318 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 OR5M1Q8NGP8 315 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 AGR3Q8TD06 166 aa6.56□□□□□ -1.36
PTPRF-210ENST00000463041 SFXN5Q8TD22 340 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms