RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 C1orf109Q9NX04 203 aa13.81□□□□□ -0.2
SKA3-204ENST00000462482 SH3BP4Q9P0V3 963 aa13.81□□□□□ -0.2
SKA3-204ENST00000462482 MID2Q9UJV3 735 aa13.81□□□□□ -0.2
SKA3-204ENST00000462482 CLEC4AQ9UMR7 237 aa13.81□□□□□ -0.2
SKA3-204ENST00000462482 KIAA1549Q9HCM3 1950 aa13.81□□□□□ -0.2
SKA3-204ENST00000462482 SCDO00767 359 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 TMCC2O75069 709 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 SS18L1O75177 396 aaPredicted RBP13.8□□□□□ -0.2
SKA3-204ENST00000462482 NKX2-2O95096 273 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 OXSR1O95747 527 aaPredicted RBP13.8□□□□□ -0.2
SKA3-204ENST00000462482 HSPA4LO95757 839 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 NGFRP08138 427 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 ALOX5P09917 674 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 NEFHP12036 1026 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 CPA3P15088 417 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 LCN1P31025 176 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 SERPINB4P48594 390 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 RAC1P63000 192 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 GUSBP1Q15486 140 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 TMEM44Q2T9K0 475 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 CPTPQ5TA50 214 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 HBMQ6B0K9 141 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 ESPNLQ6ZVH7 1005 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 GGNQ86UU5 652 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 EXOC3L1Q86VI1 746 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 OR2V1Q8NHB1 315 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 ARSGQ96EG1 525 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 ZNF764Q96H86 408 aaPredicted RBP13.8□□□□□ -0.2
SKA3-204ENST00000462482 EGLN2Q96KS0 407 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 MS4A4EQ96PG1 132 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 HS3ST6Q96QI5 342 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 CCT7Q99832 543 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 GSX2Q9BZM3 304 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 REEP4Q9H6H4 257 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 TIGARQ9NQ88 270 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 UBQLN4Q9NRR5 601 aa13.8□□□□□ -0.2
SKA3-204ENST00000462482 HRNRQ86YZ3 2850 aaPredicted RBP13.79□□□□□ -0.2
SKA3-204ENST00000462482 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.79□□□□□ -0.2
SKA3-204ENST00000462482 A0A1W2PRB8 838 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 KIF2AO00139 706 aaPredicted RBP13.79□□□□□ -0.2
SKA3-204ENST00000462482 AKAP10O43572 662 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 CXCL13O43927 109 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 IGKV1D-16P01601 117 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 PROCP04070 461 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 TUBBP07437 444 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 IL11P20809 199 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 SLC6A8P48029 635 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 PTH2RP49190 550 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 PRIM2P49643 509 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.79□□□□□ -0.2
SKA3-204ENST00000462482 ZCCHC12Q6PEW1 402 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 APOOLQ6UXV4 268 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 ZNF704Q6ZNC4 412 aaPredicted RBP13.79□□□□□ -0.2
SKA3-204ENST00000462482 GALNT10Q86SR1 603 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 WFDC8Q8IUA0 241 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 COX18Q8N8Q8 333 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 GATSQ8NAP1 163 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 OR4C3Q8NH37 302 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 JADE3Q92613 823 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 SH3YL1Q96HL8 342 aaPredicted RBP13.79□□□□□ -0.2
SKA3-204ENST00000462482 MARK4Q96L34 752 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 TACO1Q9BSH4 297 aaKnown RBP13.79□□□□□ -0.2
SKA3-204ENST00000462482 ACSS1Q9NUB1 689 aaPredicted RBP13.79□□□□□ -0.2
SKA3-204ENST00000462482 MED17Q9NVC6 651 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 EMCNQ9ULC0 261 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 GPR52Q9Y2T5 361 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 FIS1Q9Y3D6 152 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 NAV3Q8IVL0 2385 aa13.79□□□□□ -0.2
SKA3-204ENST00000462482 DOCK7Q96N67 2140 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 A0A1W2PPM1 405 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 C7orf72A4D263 438 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 TRIM64A6NGJ6 449 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 TRIM64BA6NI03 449 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 COPEO14579 308 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 TNFSF11O14788 317 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 AZIN1O14977 448 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 PLIN3O60664 434 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 TBX19O60806 448 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 OPN1LWP04000 364 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 ATP6V1C1P21283 382 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 PRPH2P23942 346 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 PCSK6P29122 969 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 EIF1P41567 113 aaKnown RBP13.78□□□□□ -0.2
SKA3-204ENST00000462482 ASMTP46597 345 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 CARD18P57730 90 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 SLC18A2Q05940 514 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 LIPMQ5VYY2 423 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 CLEC6AQ6EIG7 209 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 ALKBH2Q6NS38 261 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 ANKRD26P1Q6NSI1 321 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 FIGNL1Q6PIW4 674 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 STAC2Q6ZMT1 411 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 SH2D5Q6ZV89 423 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 R3HCC1LQ7Z5L2 792 aaKnown RBP13.78□□□□□ -0.2
SKA3-204ENST00000462482 CIARTQ8N365 385 aaPredicted RBP13.78□□□□□ -0.2
SKA3-204ENST00000462482 ZNF527Q8NB42 609 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 STEAP2Q8NFT2 490 aa13.78□□□□□ -0.2
SKA3-204ENST00000462482 B4GALNT2Q8NHY0 566 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms