RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 SEMA7AO75326 666 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 IGKV1D-16P01601 117 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 IGHG3P01860 377 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 HPNP05981 417 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 NGFRP08138 427 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 ZCCHC18P0CG32 403 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 IL7RP16871 459 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 ACVR2AP27037 513 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 PTPN6P29350 595 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 PTGER4P35408 488 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 DSTNP60981 165 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 GNGT1P63211 74 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 SRYQ05066 204 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
PKP4-208ENST00000462335 SAXO2Q658L1 398 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 PPP4R4Q6NUP7 873 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 RPTNQ6XPR3 784 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 EIF3MQ7L2H7 374 aaKnown RBP8.72□□□□□ -1.01
PKP4-208ENST00000462335 P4HA3Q7Z4N8 544 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 DOLPP1Q86YN1 238 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 PEX5LQ8IYB4 626 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 MEIOBQ8N635 442 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 PCYOX1LQ8NBM8 494 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 TOR1AIP2Q8NFQ8 470 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 FAM110BQ8TC76 370 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 MIPOL1Q8TD10 442 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 RND1Q92730 232 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 RELTQ969Z4 430 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 ELAC2Q9BQ52 826 aaKnown RBP8.72□□□□□ -1.01
PKP4-208ENST00000462335 VKORC1Q9BQB6 163 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 PIGQQ9BRB3 760 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 THUMPD3Q9BV44 507 aaKnown RBP8.72□□□□□ -1.01
PKP4-208ENST00000462335 CCDC134Q9H6E4 229 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 MTHFD2LQ9H903 347 aaPredicted RBP8.72□□□□□ -1.01
PKP4-208ENST00000462335 TPT1P8Q9HAU6 139 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 POLE3Q9NRF9 147 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.72□□□□□ -1.01
PKP4-208ENST00000462335 FLRT3Q9NZU0 649 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 SLC13A4Q9UKG4 626 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 MKLN1Q9UL63 735 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 DTNAQ9Y4J8 743 aa8.72□□□□□ -1.01
PKP4-208ENST00000462335 MYO18BQ8IUG5 2567 aa8.71□□□□□ -1.01
PKP4-208ENST00000462335 DNAJC13O75165 2243 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 NPIPA5A0A0B4J1W7 369 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 A0A1B0GVC2 190 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 A0A1W2PQD3 144 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 GMNCA6NCL1 334 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 AHRRA9YTQ3 701 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 NPIPA7E9PJI5 369 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 LINC01387J3KSC0 135 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 SCN2BO60939 215 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 ZIC2O95409 532 aaPredicted RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 CSTAP01040 98 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 NPIPA8P0DM63 369 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 UBL4AP11441 157 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 UQCRBP14927 111 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 POU3F2P20265 443 aaPredicted RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 MAP3K8P41279 467 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 CDKN2CP42773 168 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 MRPL19P49406 292 aaKnown RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 PMPCAQ10713 525 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 NFYCQ13952 458 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 CYLC2Q14093 348 aaPredicted RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 LARS2Q15031 903 aaKnown RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 SGCBQ16585 318 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 PDSS1Q5T2R2 415 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 XKRXQ6PP77 449 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 B3GNT6Q6ZMB0 384 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 Q6ZPB1 254 aaPredicted RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 MRGPRGQ86SM5 289 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 KRT73Q86Y46 540 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 ZNF619Q8N2I2 560 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 WDSUB1Q8N9V3 476 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 CHDHQ8NE62 594 aaPredicted RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 OR2M3Q8NG83 312 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 ZNF563Q8TA94 476 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 CA5BP1Q8WTZ4 195 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 TSPEARQ8WU66 669 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 SMPDL3BQ92485 455 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 GTF2H4Q92759 462 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 HOXB13Q92826 284 aaPredicted RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 LRRC46Q96FV0 321 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 TRNT1Q96Q11 434 aaKnown RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 SH3GL1Q99961 368 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 PRRG4Q9BZD6 226 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 PNPLA3Q9NST1 481 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 FBXO34Q9NWN3 711 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 GID8Q9NWU2 228 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 TNFRSF10DQ9UBN6 386 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 FBXL2Q9UKC9 423 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 VDAC3Q9Y277 283 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 CARD8Q9Y2G2 431 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 ZNF835Q9Y2P0 537 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 MEMO1Q9Y316 297 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 MRPS18CQ9Y3D5 142 aaKnown RBP8.71□□□□□ -1.02
PKP4-208ENST00000462335 PCDHB14Q9Y5E9 798 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 LIPGQ9Y5X9 500 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 KCNE3Q9Y6H6 103 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 CAPN7Q9Y6W3 813 aa8.71□□□□□ -1.02
PKP4-208ENST00000462335 BSNQ9UPA5 3926 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms