RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 NPIPA5E9PKD4 350 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 TSPAN12O95859 305 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 EPOP01588 193 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 NR2F1P10589 423 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 DNASE1P24855 282 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 GCH1P30793 250 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 NSG1P42857 185 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 OR1D4P47884 311 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 PNLIPRP2P54317 469 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 GBE1Q04446 702 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 RPA4Q13156 261 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 MSLNQ13421 630 aaPredicted RBP4.37□□□□□ -1.71
COPS3-204ENST00000462236 KEAP1Q14145 624 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 DEFB113Q30KQ7 82 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 TCP11X2Q5H9J9 407 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 C18orf63Q68DL7 685 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 TMEM211Q6ICI0 200 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 PPP1R2P3Q6NXS1 205 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 FAM151BQ6UXP7 276 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 C3P1Q6ZMU1 363 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 SDCCAG8Q86SQ7 713 aaPredicted RBP4.37□□□□□ -1.71
COPS3-204ENST00000462236 NT5DC3Q86UY8 548 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 CDC20BQ86Y33 519 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 HSCBQ8IWL3 235 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 PHC2Q8IXK0 858 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 EID3Q8N140 333 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 RPRMLQ8N4K4 120 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 GCSAMQ8N6F7 178 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 MLKLQ8NB16 471 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 GDAP1Q8TB36 358 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 FAM57AQ8TBR7 257 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 CCDC110Q8TBZ0 833 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 TMED6Q8WW62 240 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 RND1Q92730 232 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 TFGQ92734 400 aaPredicted RBP4.37□□□□□ -1.71
COPS3-204ENST00000462236 NEUROG1Q92886 237 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 ZNF653Q96CK0 615 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 RBM41Q96IZ5 413 aaKnown RBP4.37□□□□□ -1.71
COPS3-204ENST00000462236 C10orf90Q96M02 699 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 DUX5Q96PT3 197 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 C19orf43Q9BQ61 176 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 GPATCH1Q9BRR8 931 aaKnown RBP4.37□□□□□ -1.71
COPS3-204ENST00000462236 ZNF670Q9BS34 389 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 THAP2Q9H0W7 228 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 HIPK2Q9H2X6 1198 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 HRH4Q9H3N8 390 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 PIGMQ9H3S5 423 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 TRIM45Q9H8W5 580 aaPredicted RBP4.37□□□□□ -1.71
COPS3-204ENST00000462236 COG4Q9H9E3 785 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 SEBOXQ9HB31 216 aaPredicted RBP4.37□□□□□ -1.71
COPS3-204ENST00000462236 NOX4Q9NPH5 578 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 COQ3Q9NZJ6 369 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 OR6C2Q9NZP2 312 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 C3orf18Q9UK00 162 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 FBXL2Q9UKC9 423 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 NPIPA1Q9UND3 350 aa4.37□□□□□ -1.71
COPS3-204ENST00000462236 TRBV5-4A0A0C4DH59 114 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 OR2A25A4D2G3 310 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 SYNDIG1LA6NDD5 238 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 IDSB3KWA1 339 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 KCNK1O00180 336 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 TTI1O43156 1089 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 AHCYL1O43865 530 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 CTSVO60911 334 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 ZWINTO95229 277 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 PMS2P2O95744 297 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 ABOP16442 354 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 MSH3P20585 1137 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 MAGP20916 626 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 S1PR1P21453 382 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 PKLRP30613 574 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 SHMT2P34897 504 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 MSH2P43246 934 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 RAB28P51157 221 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 EEF1A1P68104 462 aaKnown RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 GAGE2BQ13066 116 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 FHL1Q13642 323 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 PIGHQ14442 188 aaPredicted RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 KIR2DS3Q14952 304 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 KRT31Q15323 416 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 GAGE2EQ4V326 116 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 HSP90AA4PQ58FG1 418 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 TCTE1Q5JU00 501 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 PAPPA-AS1Q5QFB9 102 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 CCDC122Q5T0U0 273 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 EEF1A1P5Q5VTE0 462 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 SHEQ5VZ18 495 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 GAGE2AQ6NT46 116 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 PRMT9Q6P2P2 845 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 CNSTQ6PJW8 725 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 FIGLAQ6QHK4 219 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 DET1Q7L5Y6 550 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 GPR180Q86V85 440 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 CFAP206Q8IYR0 622 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 TBC1D21Q8IYX1 336 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 RNF113BQ8IZP6 322 aaKnown RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 CIARTQ8N365 385 aaPredicted RBP4.36□□□□□ -1.71
COPS3-204ENST00000462236 AMER3Q8N944 861 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 CCDC89Q8N998 374 aa4.36□□□□□ -1.71
COPS3-204ENST00000462236 LINC01555Q8NAE3 123 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms