RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 TCHHL1Q5QJ38 904 aaPredicted RBP9.66□□□□□ -0.86
CBX3-205ENST00000462165 SFRP5Q5T4F7 317 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 ALKBH2Q6NS38 261 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 GALNT18Q6P9A2 607 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 DTX2Q86UW9 622 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 GTPBP8Q8N3Z3 284 aaPredicted RBP9.66□□□□□ -0.86
CBX3-205ENST00000462165 KBTBD8Q8NFY9 601 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 OR2V1Q8NHB1 315 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 HSD17B8Q92506 261 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 ZBTB8AQ96BR9 441 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 NPAS1Q99742 590 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 RHNO1Q9BSD3 238 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 LMF2Q9BU23 707 aaKnown RBP9.66□□□□□ -0.86
CBX3-205ENST00000462165 TRIM2Q9C040 744 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 ALG2Q9H553 416 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 FBXO34Q9NWN3 711 aa9.66□□□□□ -0.86
CBX3-205ENST00000462165 GDF2Q9UK05 429 aaPredicted RBP9.66□□□□□ -0.86
CBX3-205ENST00000462165 IGHV4-30-2A0A087WSY4 118 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 A0A0J9YW62 118 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 DPRXA6NFQ7 191 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 UPK1AO00322 258 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 MANBAO00462 879 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 GMFGO60234 142 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 CD8AP01732 235 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 KRT6AP02538 564 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 KRT6BP04259 564 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 JUNP05412 331 aaKnown RBP9.65□□□□□ -0.86
CBX3-205ENST00000462165 TSPAN8P19075 237 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 PSMA4P25789 261 aaKnown RBP9.65□□□□□ -0.86
CBX3-205ENST00000462165 TIA1P31483 386 aaKnown RBP eCLIP9.65□□□□□ -0.86
CBX3-205ENST00000462165 HSD17B3P37058 310 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 KRT6CP48668 564 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 GNG11P61952 73 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 CLCQ05315 142 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 BSPH1Q075Z2 132 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 ACSM2AQ08AH3 577 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 ZNHIT3Q15649 155 aaPredicted RBP9.65□□□□□ -0.86
CBX3-205ENST00000462165 TSC22D1Q15714 1073 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 NRF1Q16656 503 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 GRAMD1BQ3KR37 738 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 PDSS1Q5T2R2 415 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 CPTPQ5TA50 214 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 ACSM2BQ68CK6 577 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 TMEM107Q6UX40 140 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 SEZ6L2Q6UXD5 910 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 TFAP2EQ6VUC0 442 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.65□□□□□ -0.86
CBX3-205ENST00000462165 OR2L13Q8N349 312 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 CDYL2Q8N8U2 506 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 PIWIL2Q8TC59 973 aaKnown RBP9.65□□□□□ -0.86
CBX3-205ENST00000462165 APIPQ96GX9 242 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 USB1Q9BQ65 265 aaKnown RBP9.65□□□□□ -0.86
CBX3-205ENST00000462165 C3orf14Q9HBI5 128 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 HHATLQ9HCP6 504 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 DMGDHQ9UI17 866 aaKnown RBP9.65□□□□□ -0.86
CBX3-205ENST00000462165 GRID1Q9ULK0 1009 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 UTP11Q9Y3A2 253 aaKnown RBP9.65□□□□□ -0.86
CBX3-205ENST00000462165 ALPK2Q86TB3 2170 aa9.65□□□□□ -0.86
CBX3-205ENST00000462165 A0A1W2PRB8 838 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 TTC36A6NLP5 189 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 A8MT66 165 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 ALG1L2C9J202 215 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 SSX4O60224 188 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 ULK1O75385 1050 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 IGKV1D-16P01601 117 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 OPN1LWP04000 364 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 IFI6P09912 130 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 SBK3P0C264 359 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 PABPC4LP0CB38 370 aaKnown RBP9.64□□□□□ -0.87
CBX3-205ENST00000462165 COL6A2P12110 1019 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 DDCP20711 480 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 IL32P24001 234 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 THBS2P35442 1172 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 RFX3P48380 749 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 NCBP2P52298 156 aaKnown RBP eCLIP9.64□□□□□ -0.87
CBX3-205ENST00000462165 VLDLRP98155 873 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 LOXL1Q08397 574 aaPredicted RBP9.64□□□□□ -0.87
CBX3-205ENST00000462165 RASA2Q15283 850 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 ZNF239Q16600 458 aaKnown RBP9.64□□□□□ -0.87
CBX3-205ENST00000462165 PRSS53Q2L4Q9 553 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 TMEM249Q2WGJ8 235 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 PLPPR5Q32ZL2 321 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 TMEM201Q5SNT2 666 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 HBMQ6B0K9 141 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 ZDHHC24Q6UX98 284 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 NUFIP2Q7Z417 695 aaKnown RBP9.64□□□□□ -0.87
CBX3-205ENST00000462165 ATG4DQ86TL0 474 aaPredicted RBP9.64□□□□□ -0.87
CBX3-205ENST00000462165 TRABD2AQ86V40 505 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 ZNF619Q8N2I2 560 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 TMEM151AQ8N4L1 468 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 SPATA4Q8NEY3 305 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 OR10H5Q8NGA6 315 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 ACTRT2Q8TDY3 377 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 RNF128Q8TEB7 428 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 ROBO4Q8WZ75 1007 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 SLC9A6Q92581 669 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 OSTF1Q92882 214 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 ELP4Q96EB1 424 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 KLHL15Q96M94 604 aa9.64□□□□□ -0.87
CBX3-205ENST00000462165 RNF145Q96MT1 663 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms