RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PGRMC2O15173 223 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 SUV39H1O43463 412 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 LDB3O75112 727 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 IGHEP01854 428 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 KRT6AP02538 564 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 KRT6BP04259 564 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 SERPINE1P05121 402 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 CYC1P08574 325 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 FAM58BPP0C7Q3 252 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 C8orf89P0DMQ9 161 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 UROSP10746 265 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 NR1D1P20393 614 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 MATN1P21941 496 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 HMOX2P30519 316 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 HPDP32754 393 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 KRT6CP48668 564 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 CCL11P51671 97 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 RAP1GDS1P52306 607 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 BLOC1S1P78537 153 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 FOXD4Q12950 439 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 CSTF3Q12996 717 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 TUBA3CQ13748 450 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 FNDC7Q5VTL7 733 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 TUBA3EQ6PEY2 450 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 DGAT2L6Q6ZPD8 337 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 RNF165Q6ZSG1 346 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 CPEB2Q7Z5Q1 589 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 WDR53Q7Z5U6 358 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 OR4N5Q8IXE1 308 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 C1orf52Q8N6N3 182 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 NFAM1Q8NET5 270 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 FDCSPQ8NFU4 85 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 AGR3Q8TD06 166 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 MGARPQ8TDB4 240 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 PSMF1Q92530 271 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 TM4SF18Q96CE8 201 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF503Q96F45 646 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 C3orf30Q96M34 536 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 NPAS1Q99742 590 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 NUDT9Q9BW91 350 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 ZBTB20Q9HC78 741 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF160Q9HCG1 818 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 ARGLU1Q9NWB6 273 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 TEX10Q9NXF1 929 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 VPS29Q9UBQ0 182 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 GIMAP2Q9UG22 337 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 HSF4Q9ULV5 492 aa7.42□□□□□ -1.22
ECHDC1-212ENST00000461239 PRRC2CQ9Y520 2896 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 GLOD5A6NK44 160 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 A6NL46 340 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 PRSS47A8MTI9 375 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 H0YIZ8 118 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 H3BQF6 201 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 FGF17O60258 216 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 CTNSO60931 367 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 SNNO75324 88 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 C1QL1O75973 258 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 AIFM1O95831 613 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 HPP00738 406 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 LINC00032P0C843 101 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF10P21506 573 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 CPN2P22792 545 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 JAK1P23458 1154 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 PRPH2P23942 346 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 FPR3P25089 353 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 SERPINB5P36952 375 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 SLC1A6P48664 564 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 GPR143P51810 404 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 HSD17B7P56937 341 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 ABCE1P61221 599 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 SKP1P63208 163 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 PHEXP78562 749 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 IGLV3-21P80748 117 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 TNFRSF17Q02223 184 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 ID2Q02363 134 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF33BQ06732 778 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 TGM3Q08188 693 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 BST1Q10588 318 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 RAPSNQ13702 412 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 NSDHLQ15738 373 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 SFT2D3Q587I9 215 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 XKR7Q5GH72 579 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 PLAC9Q5JTB6 97 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 SH2D4BQ5SQS7 431 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 MFSD4BQ5TF39 518 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 NDUFAF7Q7L592 441 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 PEG10Q86TG7 708 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 GPR180Q86V85 440 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 NUDT13Q86X67 352 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF595Q8IYB9 648 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 CLYBLQ8N0X4 340 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 GALNT16Q8N428 558 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 GALNT4Q8N4A0 578 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 ZNF781Q8N8C0 355 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 GBP7Q8N8V2 638 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 WBP1Q96G27 269 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 IP6K3Q96PC2 410 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 SNX18Q96RF0 628 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 NPAS2Q99743 824 aa7.41□□□□□ -1.22
ECHDC1-212ENST00000461239 ELOVL1Q9BW60 279 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms