RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 PLPPR5Q32ZL2 321 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 TCHHL1Q5QJ38 904 aaPredicted RBP13□□□□□ -0.33
DNMT3A-207ENST00000461228 GTF2IRD2BQ6EKJ0 949 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 GTF2IRD2Q86UP8 949 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 DTX2Q86UW9 622 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 SLC22A9Q8IVM8 553 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 CPNE4Q96A23 557 aaPredicted RBP13□□□□□ -0.33
DNMT3A-207ENST00000461228 TMEM237Q96Q45 408 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 BBS4Q96RK4 519 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 ESRP2Q9H6T0 727 aaKnown RBP13□□□□□ -0.33
DNMT3A-207ENST00000461228 NTMQ9P121 344 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 SVEP1Q4LDE5 3571 aa13□□□□□ -0.33
DNMT3A-207ENST00000461228 EIF1AYO14602 144 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 NKX2-2O95096 273 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 UTS2O95399 124 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 SYNGR4O95473 234 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 F12P00748 615 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 TP53P04637 393 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 ANXA4P09525 319 aaPredicted RBP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 ME2P23368 584 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 EIF1P41567 113 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 SLC6A8P48029 635 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 NCBP2P52298 156 aaKnown RBP eCLIP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 STX5Q13190 355 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 P2RY6Q15077 328 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 ZNF239Q16600 458 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 NRF1Q16656 503 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 NCMAPQ5T1S8 102 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 PDSS1Q5T2R2 415 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 FAM71E1Q6IPT2 247 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 TMEM107Q6UX40 140 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 SEZ6L2Q6UXD5 910 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 TFAP2EQ6VUC0 442 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 GALNT10Q86SR1 603 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 TRABD2AQ86V40 505 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 OR2V1Q8NHB1 315 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 DUSP19Q8WTR2 217 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 ELP4Q96EB1 424 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 AMDHD1Q96NU7 426 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 IQCGQ9H095 443 aaKnown RBP12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 L2HGDHQ9H9P8 463 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 KLHL13Q9P2N7 655 aa12.99□□□□□ -0.33
DNMT3A-207ENST00000461228 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.98□□□□□ -0.332e-10■■■□□ 15.4
DNMT3A-207ENST00000461228 DLX3O60479 287 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 TBX19O60806 448 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 RSL1D1O76021 490 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 FESP07332 822 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 TCEA1P23193 301 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 PRPH2P23942 346 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 ADH6P28332 368 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 THBS2P35442 1172 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 ZNF41P51814 821 aaPredicted RBP12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 SUMO3P55854 103 aaPredicted RBP12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 EXOC3L2Q2M3D2 409 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 ZNF672Q499Z4 452 aaPredicted RBP12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 C8orf74Q6P047 294 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 TIFABQ6ZNK6 161 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 RNF165Q6ZSG1 346 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 RPS27LQ71UM5 84 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 HOMEZQ8IX15 550 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 CDRT4Q8N9R6 151 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 METTL6Q8TCB7 284 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 DCAKDQ8WVC6 231 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 TMEM158Q8WZ71 300 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 HSD17B8Q92506 261 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 APIPQ96GX9 242 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 MS4A4EQ96PG1 132 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 REG4Q9BYZ8 158 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 PRRG4Q9BZD6 226 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 SLCO5A1Q9H2Y9 848 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 CDC42EP4Q9H3Q1 356 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 FAIMQ9NVQ4 179 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 FLRT3Q9NZU0 649 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 LAMP3Q9UQV4 416 aa12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 YLPM1P49750 1951 aaKnown RBP12.98□□□□□ -0.33
DNMT3A-207ENST00000461228 A0A1W2PRB8 838 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 GJE1A6NN92 205 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 SUPT7LO94864 414 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 OXSR1O95747 527 aaPredicted RBP12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 JUNP05412 331 aaKnown RBP12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 CHN1P15882 459 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 IMPDH1P20839 514 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 ATP5F1P24539 256 aaPredicted RBP12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 FRKP42685 505 aaPredicted RBP12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 HTR6P50406 440 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 PRKAA2P54646 552 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 TRADDQ15628 312 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 GRAMD1BQ3KR37 738 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 UNC50Q53HI1 259 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 EXOSC6Q5RKV6 272 aaKnown RBP12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 ANKRD34AQ69YU3 496 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 ZCCHC12Q6PEW1 402 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 APOOLQ6UXV4 268 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 TRIM46Q7Z4K8 759 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 MARCH3Q86UD3 253 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 OR6Y1Q8NGX8 325 aa12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 LILRB1Q8NHL6 650 aaPredicted RBP12.97□□□□□ -0.33
DNMT3A-207ENST00000461228 S100PBPQ96BU1 408 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms