RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 NPIPA7E9PJI5 369 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 HMGN4O00479 90 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 ANGPT2O15123 496 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 NPIPA8P0DM63 369 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 ENDOUP21128 410 aaKnown RBP16.74■□□□□ 0.27
DDR1-241ENST00000460944 DPP4P27487 766 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 CRATP43155 626 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 DSCR4P56555 118 aaPredicted RBP16.74■□□□□ 0.27
DDR1-241ENST00000460944 SRSF1Q07955 248 aaKnown RBP eCLIP16.74■□□□□ 0.27
DDR1-241ENST00000460944 GPR68Q15743 365 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 GTDC1Q4AE62 458 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 GPAT3Q53EU6 434 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 MTERF4Q7Z6M4 381 aaKnown RBP16.74■□□□□ 0.27
DDR1-241ENST00000460944 IFNEQ86WN2 208 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 DOLPP1Q86YN1 238 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 FADS6Q8N9I5 356 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 OR2M3Q8NG83 312 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 SSC4DQ8WTU2 575 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 TSPEARQ8WU66 669 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 ROPN1LQ96C74 230 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 ZNF350Q9GZX5 532 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 PAIP1Q9H074 479 aaKnown RBP16.74■□□□□ 0.27
DDR1-241ENST00000460944 TP63Q9H3D4 680 aaPredicted RBP16.74■□□□□ 0.27
DDR1-241ENST00000460944 SLC6A13Q9NSD5 602 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 TAS2R10Q9NYW0 307 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 MED11Q9P086 117 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 SPRR3Q9UBC9 169 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 LIPT1Q9Y234 373 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 WDR45Q9Y484 360 aa16.74■□□□□ 0.27
DDR1-241ENST00000460944 SPTAN1Q13813 2472 aaKnown RBP16.73■□□□□ 0.27
DDR1-241ENST00000460944 IGLV3-32A0A0A0MS00 114 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 FIGNL2A6NMB9 653 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 C17orf51A8MQB3 221 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 ADAM10O14672 748 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 ZNF630Q2M218 657 aaPredicted RBP16.73■□□□□ 0.27
DDR1-241ENST00000460944 GXYLT1Q4G148 440 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 AURKBQ96GD4 344 aaPredicted RBP16.73■□□□□ 0.27
DDR1-241ENST00000460944 NMUR2Q9GZQ4 415 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 P2RX2Q9UBL9 471 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 TNFRSF10DQ9UBN6 386 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 MKLN1Q9UL63 735 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 SLC6A5Q9Y345 797 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 NDUFAF1Q9Y375 327 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 MRPS18CQ9Y3D5 142 aaKnown RBP16.73■□□□□ 0.27
DDR1-241ENST00000460944 DTNAQ9Y4J8 743 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 PCDHB14Q9Y5E9 798 aa16.73■□□□□ 0.27
DDR1-241ENST00000460944 TMEM247A6NEH6 219 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 FAM47E-STBD1D6RA91 191 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 CLIC1O00299 241 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 KIAA0513O60268 411 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 FCMRO60667 390 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 LDLRP01130 860 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 C1QCP02747 245 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 GUSBP08236 651 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 SNRPB2P08579 225 aaKnown RBP16.72■□□□□ 0.27
DDR1-241ENST00000460944 NR2F1P10589 423 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 HK1P19367 917 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 TCEA1P23193 301 aaKnown RBP16.72■□□□□ 0.27
DDR1-241ENST00000460944 PPIBP23284 216 aaKnown RBP16.72■□□□□ 0.27
DDR1-241ENST00000460944 MSX1P28360 303 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 DSTNP60981 165 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 PAGE3Q5JUK9 113 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 COX20Q5RI15 118 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDR1-241ENST00000460944 LRIF1Q5T3J3 769 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 ZNF585AQ6P3V2 769 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 AAGABQ6PD74 315 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 OR5M9Q8NGP3 310 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 PHOSPHO1Q8TCT1 267 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 C10orf82Q8WW14 230 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 ABTB1Q969K4 478 aaPredicted RBP16.72■□□□□ 0.27
DDR1-241ENST00000460944 SH3YL1Q96HL8 342 aaPredicted RBP16.72■□□□□ 0.27
DDR1-241ENST00000460944 SFXN2Q96NB2 322 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 SLC52A3Q9NQ40 469 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 PNPLA3Q9NST1 481 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 THUMPD1Q9NXG2 353 aaKnown RBP16.72■□□□□ 0.27
DDR1-241ENST00000460944 MEMO1Q9Y316 297 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 DOPEY1Q5JWR5 2465 aa16.72■□□□□ 0.27
DDR1-241ENST00000460944 PHF3Q92576 2039 aaKnown RBP16.72■□□□□ 0.27
DDR1-241ENST00000460944 E9PLN8 166 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 NPIPB9F8W1W9 429 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 GTPBP1O00178 669 aaKnown RBP16.71■□□□□ 0.27
DDR1-241ENST00000460944 HCRTR2O43614 444 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 GMFGO60234 142 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 WDR1O75083 606 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 ACTL6AO96019 429 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 LSP1P33241 339 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 ZNF41P51814 821 aaPredicted RBP16.71■□□□□ 0.27
DDR1-241ENST00000460944 GNGT1P63211 74 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 CRYZQ08257 329 aaKnown RBP16.71■□□□□ 0.27
DDR1-241ENST00000460944 FUT5Q11128 374 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 MAPRE2Q15555 327 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 CD226Q15762 336 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 KLHL26Q53HC5 615 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 NHSL2Q5HYW2 709 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 PDZK1Q5T2W1 519 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 RAET1LQ5VY80 246 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 TYW3Q6IPR3 259 aaKnown RBP16.71■□□□□ 0.27
DDR1-241ENST00000460944 ENPP6Q6UWR7 440 aa16.71■□□□□ 0.27
DDR1-241ENST00000460944 C3P1Q6ZMU1 363 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms