RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 NDUFB5O43674 189 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 CD8BP10966 210 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 BCKDHAP12694 445 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 TBXA2RP21731 343 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 FOXD4Q12950 439 aaPredicted RBP20.49■□□□□ 0.87
PTPN4-207ENST00000460162 GUSBP1Q15486 140 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 DUSP5Q16690 384 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 UGT3A2Q3SY77 523 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 ARL13AQ5H913 290 aaPredicted RBP20.49■□□□□ 0.87
PTPN4-207ENST00000460162 BTLAQ7Z6A9 289 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 GGNQ86UU5 652 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 EXOC3L1Q86VI1 746 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 MISPQ8IVT2 679 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 SLC16A11Q8NCK7 471 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 OR2W6PQ8NHA6 318 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 FAM110BQ8TC76 370 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 PPP3R2Q96LZ3 170 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 ELOVL5Q9NYP7 299 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 LGALS13Q9UHV8 139 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 VDAC3Q9Y277 283 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 TRAF6Q9Y4K3 522 aa20.49■□□□□ 0.87
PTPN4-207ENST00000460162 A0A1W2PPR1 153 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 C7orf72A4D263 438 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 SCAMP2O15127 329 aaKnown RBP20.48■□□□□ 0.87
PTPN4-207ENST00000460162 GMFGO60234 142 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 KCNK2O95069 426 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 HSPA4LO95757 839 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 ALOX5P09917 674 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 CCKARP32238 428 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 SERPINB5P36952 375 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 SERPINB4P48594 390 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 PRIM2P49643 509 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 FAM27E3Q08E93 113 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 XKR7Q5GH72 579 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 EXOSC6Q5RKV6 272 aaKnown RBP20.48■□□□□ 0.87
PTPN4-207ENST00000460162 FIGNL1Q6PIW4 674 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 ZNF474Q6S9Z5 364 aaPredicted RBP20.48■□□□□ 0.87
PTPN4-207ENST00000460162 GALNT10Q86SR1 603 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 COX18Q8N8Q8 333 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 OR4C3Q8NH37 302 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 ZBTB8AQ96BR9 441 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 SLC39A3Q9BRY0 314 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 MECRQ9BV79 373 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 OPN3Q9H1Y3 402 aaPredicted RBP20.48■□□□□ 0.87
PTPN4-207ENST00000460162 ANKZF1Q9H8Y5 726 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 PAQR5Q9NXK6 330 aaPredicted RBP20.48■□□□□ 0.87
PTPN4-207ENST00000460162 ZNF226Q9NYT6 803 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 ATP6V1HQ9UI12 483 aa20.48■□□□□ 0.87
PTPN4-207ENST00000460162 A0A1W2PQD3 144 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 CTIFO43310 598 aaKnown RBP20.47■□□□□ 0.87
PTPN4-207ENST00000460162 CGAP01215 116 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 POU2F1P14859 743 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 ADAM8P78325 824 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 SGCBQ16585 318 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 FAM214BQ7L5A3 538 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 GTPBP8Q8N3Z3 284 aaPredicted RBP20.47■□□□□ 0.87
PTPN4-207ENST00000460162 ACTRT2Q8TDY3 377 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 JADE3Q92613 823 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 FAM120BQ96EK7 910 aaKnown RBP20.47■□□□□ 0.87
PTPN4-207ENST00000460162 STACQ99469 402 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 UBQLN4Q9NRR5 601 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 SIRT3Q9NTG7 399 aaPredicted RBP20.47■□□□□ 0.87
PTPN4-207ENST00000460162 ZCCHC3Q9NUD5 404 aaKnown RBP20.47■□□□□ 0.87
PTPN4-207ENST00000460162 SLC17A7Q9P2U7 560 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 PROCRQ9UNN8 238 aa20.47■□□□□ 0.87
PTPN4-207ENST00000460162 SHISA8B8ZZ34 492 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 SCDO00767 359 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 EIF1AYO14602 144 aaKnown RBP20.46■□□□□ 0.87
PTPN4-207ENST00000460162 HPGDP15428 266 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 UGT2B10P36537 528 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 ZNF41P51814 821 aaPredicted RBP20.46■□□□□ 0.87
PTPN4-207ENST00000460162 ATP6AP1LQ52LC2 224 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 ZAR1Q86SH2 424 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 WDR75Q8IWA0 830 aaKnown RBP20.46■□□□□ 0.87
PTPN4-207ENST00000460162 GATSQ8NAP1 163 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 MED18Q9BUE0 208 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 DLL4Q9NR61 685 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 DUSP22Q9NRW4 184 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 BEX4Q9NWD9 120 aaPredicted RBP20.46■□□□□ 0.87
PTPN4-207ENST00000460162 GIN1Q9NXP7 522 aa20.46■□□□□ 0.87
PTPN4-207ENST00000460162 VPS13CQ709C8 3753 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 A0A1W2PRB8 838 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 AQP8O94778 261 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 FOSL1P15407 271 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 CD53P19397 219 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 EFNA1P20827 205 aaPredicted RBP20.45■□□□□ 0.86
PTPN4-207ENST00000460162 CRYGSP22914 178 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 EIF1AXP47813 144 aaKnown RBP20.45■□□□□ 0.86
PTPN4-207ENST00000460162 KCNJ5P48544 419 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 POU6F2P78424 691 aaPredicted RBP20.45■□□□□ 0.86
PTPN4-207ENST00000460162 IFFO1Q0D2I5 559 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 PLPPR5Q32ZL2 321 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 ZCCHC23Q6ZST2 131 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 NATD1Q8N6N6 113 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 AGR3Q8TD06 166 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 TCP10LQ8TDR4 215 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 C16orf58Q96GQ5 468 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 ADGRG7Q96K78 797 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 WFIKKN1Q96NZ8 548 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 BTBD2Q9BX70 525 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms