RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 ACTRT3Q9BYD9 372 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 TBL1XR1Q9BZK7 514 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 ERVMER34-1Q9H9K5 563 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 ADAP2Q9NPF8 381 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 SLC22A14Q9Y267 594 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 FBXO7Q9Y3I1 522 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 PSAT1Q9Y617 370 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 ZNF736B4DX44 427 aaPredicted RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 TMEM150CB9EJG8 249 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 CCL22O00626 93 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 CACNG3O60359 315 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 SCGB2A1O75556 95 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 AKR1C4P17516 323 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 NAT1P18440 290 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 DRD5P21918 477 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 HCCSP53701 268 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 SELENOWP63302 87 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 RPP30P78346 268 aaKnown RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 ASAH1Q13510 395 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 CGB2Q6NT52 195 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 KCT2Q8NC54 265 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 ANKK1Q8NFD2 765 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 OR10G6Q8NH81 332 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 ZNF559Q9BR84 538 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 POLDIP3Q9BY77 421 aaKnown RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 SMIM30A4D0T7 59 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 FANCGO15287 622 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 NUPL2O15504 423 aaKnown RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 EMC8O43402 210 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 KCNK2O95069 426 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 EGFP01133 1207 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 APODP05090 189 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 FHP07954 510 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 GP1BBP13224 206 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 HOXB9P17482 250 aaPredicted RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 PSMB1P20618 241 aaKnown RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 ADH7P40394 386 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 NUMBP49757 651 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 RAB1AP62820 205 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 SMAD4Q13485 552 aaKnown RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 RAB31Q13636 194 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 LAPTM4AQ15012 233 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 DHRS4L2Q6PKH6 230 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 CORO6Q6QEF8 472 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 B3GNT8Q7Z7M8 397 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 NETO2Q8NC67 525 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 PROKR1Q8TCW9 393 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 CDX2Q99626 313 aaPredicted RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 OR2AG1Q9H205 316 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 ATP13A2Q9NQ11 1180 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 THSD1Q9NS62 852 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 CYB5R1Q9UHQ9 305 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 UBE2J1Q9Y385 318 aaPredicted RBP9.22□□□□□ -0.93
UFD1-205ENST00000459854 PCDHGA5Q9Y5G8 931 aa9.22□□□□□ -0.93
UFD1-205ENST00000459854 IQCF5A8MTL0 148 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 GPRIN2O60269 458 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 DFFBO76075 338 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 F10P00742 488 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 TGFB1P01137 390 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 HRGP04196 525 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 HLA-FP30511 346 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 CALCRP30988 508 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 GDI1P31150 447 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 GABRA5P31644 462 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 GIPRP48546 466 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 FAM205BPQ63HN1 556 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 PM20D1Q6GTS8 502 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 TANGO2Q6ICL3 276 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 AGTRAPQ6RW13 159 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 CD163Q86VB7 1156 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 BBS1Q8NFJ9 593 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 ST8SIA4Q92187 359 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 KCNA7Q96RP8 456 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 WIF1Q9Y5W5 379 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 METTL15A6NJ78 407 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 G3V2L1 256 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 SCAMP2O15127 329 aaKnown RBP9.21□□□□□ -0.93
UFD1-205ENST00000459854 UGDHO60701 494 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 SCGB1D1O95968 90 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 UBE2KP61086 200 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 RANP62826 216 aaKnown RBP9.21□□□□□ -0.93
UFD1-205ENST00000459854 ITPRIPL2Q3MIP1 535 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 MS4A13Q5J8X5 152 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 CES4AQ5XG92 561 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 SIGIRRQ6IA17 410 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 PTCRAQ6ISU1 281 aaPredicted RBP9.21□□□□□ -0.93
UFD1-205ENST00000459854 DPPA2Q7Z7J5 298 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 PARGQ86W56 976 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 OR6T1Q8NGN1 323 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 OR6N2Q8NGY6 317 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 OR2T4Q8NH00 348 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 CLEC4CQ8WTT0 213 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 TM9SF4Q92544 642 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 PRR11Q96HE9 360 aaPredicted RBP9.21□□□□□ -0.93
UFD1-205ENST00000459854 TMEM68Q96MH6 324 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 MED17Q9NVC6 651 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 OR6C2Q9NZP2 312 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 PRELID3BQ9Y3B1 194 aa9.21□□□□□ -0.93
UFD1-205ENST00000459854 SLC22A23A1A5C7 686 aa9.21□□□□□ -0.94
UFD1-205ENST00000459854 CASC3O15234 703 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms