RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 AAGABQ6PD74 315 aa18.82■□□□□ 0.6
VARS-218ENST00000459667 ENPP6Q6UWR7 440 aa18.82■□□□□ 0.6
VARS-218ENST00000459667 CCDC71Q8IV32 467 aaPredicted RBP18.82■□□□□ 0.6
VARS-218ENST00000459667 GATSQ8NAP1 163 aa18.82■□□□□ 0.6
VARS-218ENST00000459667 CCDC28BQ9BUN5 200 aa18.82■□□□□ 0.6
VARS-218ENST00000459667 HHATLQ9HCP6 504 aa18.82■□□□□ 0.6
VARS-218ENST00000459667 SDR39U1Q9NRG7 319 aaPredicted RBP18.82■□□□□ 0.6
VARS-218ENST00000459667 ZIM2Q9NZV7 527 aa18.82■□□□□ 0.6
VARS-218ENST00000459667 ARHGAP21Q5T5U3 1957 aa18.82■□□□□ 0.6
VARS-218ENST00000459667 CACNA1CQ13936 2221 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 IGLV3-32A0A0A0MS00 114 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 DUXAA6NLW8 204 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 GMFGO60234 142 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 HK1P19367 917 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 CHI3L1P36222 383 aaPredicted RBP18.81■□□□□ 0.6
VARS-218ENST00000459667 IDH3AP50213 366 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 AQP5P55064 265 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 LRRC74AQ0VAA2 488 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 SF3B4Q15427 424 aaKnown RBP eCLIP18.81■□□□□ 0.61e-11■■■■■ 28.1
VARS-218ENST00000459667 SAXO2Q658L1 398 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 GOT1L1Q8NHS2 421 aaPredicted RBP18.81■□□□□ 0.6
VARS-218ENST00000459667 C1GALT1C1Q96EU7 318 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 PANX1Q96RD7 426 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 SIKE1Q9BRV8 207 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 SLC35A5Q9BS91 424 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 OR51I1Q9H343 314 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 CHST11Q9NPF2 352 aa18.81■□□□□ 0.6
VARS-218ENST00000459667 NPIPA5A0A0B4J1W7 369 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 A0A1W2PQD3 144 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 FAM47E-STBD1D6RA91 191 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 NPIPA7E9PJI5 369 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 EDF1O60869 148 aaKnown RBP18.8■□□□□ 0.6
VARS-218ENST00000459667 IL6P05231 212 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 NPIPA8P0DM63 369 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 CHMP24386 653 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 CASP9P55211 416 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 FLYWCH1Q4VC44 716 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 RAET1LQ5VY80 246 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 SP5Q6BEB4 398 aaPredicted RBP18.8■□□□□ 0.6
VARS-218ENST00000459667 MIER2Q8N344 545 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 TRIML2Q8N7C3 387 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 ZNF527Q8NB42 609 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 MIPOL1Q8TD10 442 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 NEURL3Q96EH8 262 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 EBF4Q9BQW3 602 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 INPP5KQ9BT40 448 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 HOXD1Q9GZZ0 328 aa18.8■□□□□ 0.6
VARS-218ENST00000459667 A0A0G2JNJ9 132 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 FAM90A27PA6NNH2 459 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 H0Y3Z8 333 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 EPPINO95925 133 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 AK1P00568 194 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 CPN1P15169 458 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 ADH7P40394 386 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 CDKN2CP42773 168 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 STARP49675 285 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 LHX2P50458 406 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 B3GALT5-AS1P59052 145 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 IRX1P78414 480 aaPredicted RBP18.79■□□□□ 0.6
VARS-218ENST00000459667 SRYQ05066 204 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 RCAN2Q14206 197 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 RIPPLY2Q5TAB7 128 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 TNFAIP8L2Q6P589 184 aaPredicted RBP18.79■□□□□ 0.6
VARS-218ENST00000459667 SEM1Q6ZVN7 128 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 LACC1Q8IV20 430 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 MISPQ8IVT2 679 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 CHDHQ8NE62 594 aaPredicted RBP18.79■□□□□ 0.6
VARS-218ENST00000459667 OR9I1Q8NGQ6 314 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 STON2Q8WXE9 905 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 TRIB1Q96RU8 372 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 SDF2Q99470 211 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 EXD2Q9NVH0 621 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 Q9UFV3 132 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 PCNX3Q9H6A9 2034 aa18.79■□□□□ 0.6
VARS-218ENST00000459667 NBPF19A0A087WUL8 3843 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 CCDC154A6NI56 674 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 KDM4EB2RXH2 506 aaPredicted RBP18.78■□□□□ 0.6
VARS-218ENST00000459667 AGR2O95994 175 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 OR12D1P0DN82 309 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 ZNF708P17019 499 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 ZFP36L2P47974 494 aaKnown RBP18.78■□□□□ 0.6
VARS-218ENST00000459667 KHKP50053 298 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 ATP12AP54707 1039 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 CD226Q15762 336 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 NSUN5P2Q63ZY6 315 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 ZNF621Q6ZSS3 439 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 C16orf62Q7Z3J2 963 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 LILRB4Q8NHJ6 448 aa18.78■□□□□ 0.6
VARS-218ENST00000459667 SH3YL1Q96HL8 342 aaPredicted RBP18.78■□□□□ 0.6
VARS-218ENST00000459667 C19orf84I3L1E1 186 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 RFXANKO14593 260 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 TOXO94900 526 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 GSNP06396 782 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 TROVE2P10155 538 aaKnown RBP eCLIP18.77■□□□□ 0.6
VARS-218ENST00000459667 MSX1P28360 303 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 POLR2JP52435 117 aaKnown RBP18.77■□□□□ 0.6
VARS-218ENST00000459667 CLDN18P56856 261 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 ARHGAP11BQ3KRB8 267 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 GLYR1Q49A26 553 aaPredicted RBP18.77■□□□□ 0.6
VARS-218ENST00000459667 TIGD2Q4W5G0 525 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms