RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 TUBAL3A6NHL2 446 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 ANXA2P2A6NMY6 339 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 KRBOX1C9JBD0 128 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 PDCD5O14737 125 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 UBL3O95164 117 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 ADRB1P08588 477 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 GALP22466 123 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 GDNFP39905 211 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 RAD52P43351 418 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 OMPP47874 163 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 PCBP4P57723 403 aaKnown RBP9.63□□□□□ -0.87
CLIP4-208ENST00000456385 B2MP61769 119 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 HSD17B12Q53GQ0 312 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 PLBD1Q6P4A8 553 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 NXPE4Q6UWF7 544 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 NKAIN4Q8IVV8 208 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 KLHDC8AQ8IYD2 350 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 ARL14EPQ8N8R7 260 aaPredicted RBP9.63□□□□□ -0.87
CLIP4-208ENST00000456385 BBS10Q8TAM1 723 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 BCL7CQ8WUZ0 217 aaPredicted RBP9.63□□□□□ -0.87
CLIP4-208ENST00000456385 SLC5A11Q8WWX8 675 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 MYLIPQ8WY64 445 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 F2RL3Q96RI0 385 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 SAV1Q9H4B6 383 aaPredicted RBP9.63□□□□□ -0.87
CLIP4-208ENST00000456385 NEUROD4Q9HD90 331 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 WASH6PQ9NQA3 447 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 H2AFY2Q9P0M6 372 aaPredicted RBP9.63□□□□□ -0.87
CLIP4-208ENST00000456385 MGAT4CQ9UBM8 478 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 GPR160Q9UJ42 338 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 ING1Q9UK53 422 aaPredicted RBP9.63□□□□□ -0.87
CLIP4-208ENST00000456385 COPS3Q9UNS2 423 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 PPIL1Q9Y3C6 166 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 BACE2Q9Y5Z0 518 aa9.63□□□□□ -0.87
CLIP4-208ENST00000456385 CHURC1-FNTBB4DL54 471 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 CACNB4O00305 520 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 PGRMC2O15173 223 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 MID1O15344 667 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 PIP5K1CO60331 668 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 REM1O75628 298 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 APOC3P02656 99 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ASGR1P07306 291 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ATXN8OSP0DMR3 200 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ALPPL2P10696 532 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ATF1P18846 271 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 NFYAP23511 347 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 TRHRP34981 398 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 CCR8P51685 355 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ARHGDIBP52566 201 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 RAG2P55895 527 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 SNRPD1P62314 119 aaKnown RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 SHC2P98077 582 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 FUT5Q11128 374 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 MELKQ14680 651 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 TAF12Q16514 161 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 HACD4Q5VWC8 232 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 OR5M10Q6IEU7 315 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 NHLRC1Q6VVB1 395 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 CMIPQ8IY22 773 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 KRT78Q8N1N4 520 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 LINC00471Q8N535 108 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ACBD7Q8N6N7 88 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 LILRB1Q8NHL6 650 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ABHD4Q8TB40 342 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 HAVCR2Q8TDQ0 301 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 WDR34Q96EX3 536 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 IL17FQ96PD4 163 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 DPH7Q9BTV6 452 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 HCAR1Q9BXC0 346 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ZCCHC4Q9H5U6 513 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 CD93Q9NPY3 652 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 PCDHB16Q9NRJ7 776 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 TEX10Q9NXF1 929 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 RCE1Q9Y256 329 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 KCNE3Q9Y6H6 103 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 A0A0G2JN53 185 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 MCRIP1C9JLW8 97 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 LRRN3E7EW58 273 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 CDC42EP2O14613 210 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 ARPC1BO15143 372 aaKnown RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 CBX7O95931 251 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 MRPL3P09001 348 aaKnown RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 FGF2P09038 288 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 F8A1P23610 371 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 PNLIPRP1P54315 467 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 IRF5Q13568 498 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 HTR4Q13639 388 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 HLXQ14774 488 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 PGGHGQ32M88 737 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 SLC22A10Q63ZE4 541 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 TXNDC8Q6A555 127 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 SLC25A25Q6KCM7 469 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 FAAP20Q6NZ36 180 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 TMEM220Q6QAJ8 160 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 FAM83HQ6ZRV2 1179 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 GET4Q7L5D6 327 aaPredicted RBP9.62□□□□□ -0.87
CLIP4-208ENST00000456385 RRM2BQ7LG56 351 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 AMER3Q8N944 861 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 BVESQ8NE79 360 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 OR10H4Q8NGA5 316 aa9.62□□□□□ -0.87
CLIP4-208ENST00000456385 AHCYL2Q96HN2 611 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms