RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 SLC46A3Q7Z3Q1 461 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 MRGPREQ86SM8 312 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 RCBTB1Q8NDN9 531 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 TMEM80Q96HE8 168 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 OR5M11Q96RB7 305 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 CNPPD1Q9BV87 410 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 POLR2J2Q9GZM3 115 aaKnown RBP8.2□□□□□ -1.1
RPE-216ENST00000454822 OCEL1Q9H607 264 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 ARMC7Q9H6L4 198 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 CUTCQ9NTM9 273 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 ERVK-19Q9WJR5 959 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 DTX4Q9Y2E6 619 aa8.2□□□□□ -1.1
RPE-216ENST00000454822 UNC13CQ8NB66 2214 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 EFCAB9A8MZ26 197 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 TMEM150CB9EJG8 249 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 HYAL3O43820 417 aaPredicted RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 FMO6PO60774 539 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 IFNA16P05015 189 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 DBTP11182 482 aaKnown RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 GNSP15586 552 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 GLB1P16278 677 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 ALAS2P22557 587 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 GADD45AP24522 165 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 CSTF2P33240 577 aaKnown RBP eCLIP8.19□□□□□ -1.1
RPE-216ENST00000454822 OR1D4P47884 311 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 ARL4DP49703 201 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 PGDP52209 483 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 FUT7Q11130 342 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 SHBQ15464 509 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 SYT14P1Q58G82 188 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 CLEC12AQ5QGZ9 265 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 SNAP47Q5SQN1 464 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 NPSR1Q6W5P4 371 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 WDR88Q6ZMY6 472 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 TTLL10Q6ZVT0 673 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 ZNF367Q7RTV3 350 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 C11orf74Q86VG3 221 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 LSRQ86X29 649 aaPredicted RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 PLXDC1Q8IUK5 500 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 POGLUT1Q8NBL1 392 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 WDR36Q8NI36 951 aaKnown RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 TMEM163Q8TC26 289 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 CNOT9Q92600 299 aaKnown RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 OSTF1Q92882 214 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 LRR1Q96L50 414 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 ZNF578Q96N58 590 aaPredicted RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 ZNF582Q96NG8 517 aaPredicted RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 YIPF2Q9BWQ6 316 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 OR10A5Q9H207 317 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 IL20Q9NYY1 176 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 ZNF223Q9UK11 482 aaPredicted RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 CACNA1IQ9P0X4 2223 aa8.19□□□□□ -1.1
RPE-216ENST00000454822 ARID1BQ8NFD5 2236 aaPredicted RBP8.19□□□□□ -1.1
RPE-216ENST00000454822 TP53BP1Q12888 1972 aaPredicted RBP8.18□□□□□ -1.1
RPE-216ENST00000454822 C19orf67A6NJJ6 358 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 A8MU76 341 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 CDC42EP2O14613 210 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 DUX1O43812 170 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 AIREO43918 545 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 PRAMEF2O60811 474 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 HSMCR30P0CW71 290 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 CT45A8P0DMV1 189 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 CT45A9P0DMV2 189 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 PTNP21246 168 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 GALNSP34059 522 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 TGFBR1P36897 503 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 RGS6P49758 472 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 BMXP51813 675 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 BNC1Q01954 994 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 BIKQ13323 160 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 SERTAD2Q14140 314 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 MED22Q15528 200 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 CT45A2Q5DJT8 189 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 SLCO6A1Q86UG4 719 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 RNF113BQ8IZP6 322 aaKnown RBP8.18□□□□□ -1.1
RPE-216ENST00000454822 CARFQ8N187 725 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 CACTIN-AS1Q8N1I8 211 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 D2HGDHQ8N465 521 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 ZNF614Q8N883 585 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 ZNF615Q8N8J6 731 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 OR4Q3Q8NH05 313 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 OR1L3Q8NH93 324 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 C16orf52Q8NHV5 167 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 RNF217Q8TC41 542 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 DYNC2LI1Q8TCX1 351 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.18□□□□□ -1.1
RPE-216ENST00000454822 TMEM239Q8WW34 195 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 ARSGQ96EG1 525 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 PTCHD1Q96NR3 888 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 SLC38A2Q96QD8 506 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 ELF4Q99607 663 aaPredicted RBP8.18□□□□□ -1.1
RPE-216ENST00000454822 MGLLQ99685 303 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 EVA1AQ9H8M9 152 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 TMEM27Q9HBJ8 222 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 ENAMQ9NRM1 1142 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 LANCL2Q9NS86 450 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 SEMA5BQ9P283 1151 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 TESQ9UGI8 421 aaKnown RBP8.18□□□□□ -1.1
RPE-216ENST00000454822 CLEC2DQ9UHP7 191 aa8.18□□□□□ -1.1
RPE-216ENST00000454822 SEC16AO15027 2179 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms