RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ACVR2AP27037 513 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 CHI3L1P36222 383 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 MDH1P40925 334 aaKnown RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 STX5Q13190 355 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 TMEM44Q2T9K0 475 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 GTDC1Q4AE62 458 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 FLYWCH1Q4VC44 716 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 KLHL26Q53HC5 615 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 LRIF1Q5T3J3 769 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 WLSQ5T9L3 541 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 TNFAIP8L2Q6P589 184 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 NCCRP1Q6ZVX7 275 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 MTERF4Q7Z6M4 381 aaKnown RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 RNF130Q86XS8 419 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 RPRMLQ8N4K4 120 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 ZNF808Q8N4W9 903 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 SPDL1Q96EA4 605 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 C1GALT1C1Q96EU7 318 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 THOC1Q96FV9 657 aaKnown RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 ITCHQ96J02 903 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 ZNF317Q96PQ6 595 aaPredicted RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 TIMP4Q99727 224 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 HOXD1Q9GZZ0 328 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
HDAC4-205ENST00000454542 SAP130Q9H0E3 1048 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 DSN1Q9H410 356 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 POLE3Q9NRF9 147 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 EXD2Q9NVH0 621 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 TAS2R10Q9NYW0 307 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 DKKL1Q9UK85 242 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 GMEB1Q9Y692 573 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 ARHGAP21Q5T5U3 1957 aa12.86□□□□□ -0.35
HDAC4-205ENST00000454542 MYO7BQ6PIF6 2116 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 ICE1Q9Y2F5 2266 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 A0A096LPI6 279 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 TRBV5-3A0A0A0MS03 114 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 C15orf38-AP3S2A0A0A6YYH1 394 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 NPIPA5A0A0B4J1W7 369 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 A0A0G2JND7 137 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 CENPVL1A0A0U1RR11 272 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 C7orf72A4D263 438 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 NPIPA7E9PJI5 369 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 SCDO00767 359 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 NDUFB5O43674 189 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 STX11O75558 287 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 CLDN1O95832 211 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 GSNP06396 782 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 HOXD4P09016 255 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-205ENST00000454542 NPIPA8P0DM63 369 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 GABRA1P14867 456 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 CD1EP15812 388 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 CHMP24386 653 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 DPP4P27487 766 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 MSX1P28360 303 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 PTGER4P35408 488 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 LHX2P50458 406 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 ATP12AP54707 1039 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 ZNF141Q15928 474 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 GLYR1Q49A26 553 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-205ENST00000454542 ACSF3Q4G176 576 aaPredicted RBP12.85□□□□□ -0.35
HDAC4-205ENST00000454542 C1orf185Q5T7R7 199 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 METTL21CQ5VZV1 264 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 TYW3Q6IPR3 259 aaKnown RBP12.85□□□□□ -0.35
HDAC4-205ENST00000454542 C3P1Q6ZMU1 363 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 FRRS1Q6ZNA5 592 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 MSRB3Q8IXL7 192 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 ULK2Q8IYT8 1036 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 OR5M9Q8NGP3 310 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 DUSP19Q8WTR2 217 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 WDYHV1Q96HA8 205 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 TMEM120AQ9BXJ8 343 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 EXO5Q9H790 373 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 MED11Q9P086 117 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 CCDC167Q9P0B6 97 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 KCNE5Q9UJ90 142 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 TRIM33Q9UPN9 1127 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 HECTD1Q9ULT8 2610 aa12.85□□□□□ -0.35
HDAC4-205ENST00000454542 SPTBN1Q01082 2364 aaKnown RBP12.85□□□□□ -0.35
HDAC4-205ENST00000454542 PCNX3Q9H6A9 2034 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 NR5A2O00482 541 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 TNFRSF21O75509 655 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 KRT75O95678 551 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 TROVE2P10155 538 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDAC4-205ENST00000454542 ESRRAP11474 423 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-205ENST00000454542 BMP2P12643 396 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 CPN1P15169 458 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 ZNF17P17021 662 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 CASP9P55211 416 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 ZNF117Q03924 483 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 MAPK11Q15759 364 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 ZNF630Q2M218 657 aaPredicted RBP12.84□□□□□ -0.35
HDAC4-205ENST00000454542 COX20Q5RI15 118 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 SLC2A7Q6PXP3 512 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 ZNF621Q6ZSS3 439 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 C16orf62Q7Z3J2 963 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 ADGRE4PQ86SQ3 457 aa12.84□□□□□ -0.35
HDAC4-205ENST00000454542 PM20D2Q8IYS1 436 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms