RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 IFI6P09912 130 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 ST6GAL1P15907 406 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 VSX2P58304 361 aaPredicted RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 TAS2R41P59536 307 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 VBP1P61758 197 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 NCS1P62166 190 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 LSM3P62310 102 aaKnown RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 TIGD6Q17RP2 521 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 TRMT12Q53H54 448 aaKnown RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 CLIP4Q8N3C7 705 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 OR4D9Q8NGE8 314 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 C9orf43Q8TAL5 461 aaPredicted RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 DYNC2LI1Q8TCX1 351 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 ZNF675Q8TD23 568 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 TRUB1Q8WWH5 349 aaKnown RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 SLC9A6Q92581 669 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 RPL3LQ92901 407 aaKnown RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 BORCS5Q969J3 196 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 CCDC74BQ96LY2 380 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 TGM7Q96PF1 710 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 IL4I1Q96RQ9 567 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 FAM60AQ9NP50 221 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 SLC13A4Q9UKG4 626 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.95□□□□□ -0.82
PKP4-206ENST00000452162 ZNF443Q9Y2A4 671 aaPredicted RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 SPACA6W5XKT8 324 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 AHCTF1Q8WYP5 2266 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 A0A087WUU8 490 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 A8MU76 341 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 PLOD3O60568 738 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 LDB3O75112 727 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 CYP7B1O75881 506 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 GPR75O95800 540 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 CCKBRP32239 447 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 TRHRP34981 398 aaPredicted RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 MGAT2Q10469 447 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 CLPPQ16740 277 aaPredicted RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 SYT16Q17RD7 645 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 SLC46A3Q7Z3Q1 461 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 CRELD1Q96HD1 420 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 PIGUQ9H490 435 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 ANKRD19PQ9H560 264 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 TRIM45Q9H8W5 580 aaPredicted RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 MTHFD2LQ9H903 347 aaPredicted RBP9.95□□□□□ -0.82
PKP4-206ENST00000452162 STARD5Q9NSY2 213 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 MKLN1Q9UL63 735 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 LAMA5O15230 3695 aa9.95□□□□□ -0.82
PKP4-206ENST00000452162 MN1Q10571 1320 aaPredicted RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 TRABD2BA6NFA1 517 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 CPSF4LA6NMK7 179 aaKnown RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 CTSBP07858 339 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 TNNI3P19429 210 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 RPS4Y1P22090 263 aaKnown RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 RAB38P57729 211 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 OCA2Q04671 838 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 TRAM2Q15035 370 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 PRICKLE4Q2TBC4 344 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ANKDD1AQ495B1 522 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 C3orf38Q5JPI3 329 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 PLAG1Q6DJT9 500 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ARMC6Q6NXE6 501 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 KLHL35Q6PF15 583 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 CASP12Q6UXS9 341 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ZNF836Q6ZNA1 936 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ZNF367Q7RTV3 350 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 KIF18BQ86Y91 864 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 PLXDC1Q8IUK5 500 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 IQCF1Q8N6M8 205 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 C19orf47Q8N9M1 422 aaKnown RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 OR8J1Q8NGP2 316 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ANKRD9Q96BM1 317 aaPredicted RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 LGALS12Q96DT0 336 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 Q96MT0 163 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 SDF2Q99470 211 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ALOXE3Q9BYJ1 711 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ZNF350Q9GZX5 532 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 KLHL28Q9NXS3 571 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 TAS2R16Q9NYV7 291 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 MAT2BQ9NZL9 334 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 DNAJC27Q9NZQ0 273 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 SATB2Q9UPW6 733 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 IFT52Q9Y366 437 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 WDR45Q9Y484 360 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 PMF1-BGLAPU3KQ54 211 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 MAP1BP46821 2468 aaKnown RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 SGK494L7N484 410 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 M0R3G1 203 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 GSTM3P21266 225 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 MAP3K8P41279 467 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 AVPR1BP47901 424 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 EEF1A1P68104 462 aaKnown RBP9.94□□□□□ -0.82
PKP4-206ENST00000452162 CDK5Q00535 292 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 OCLNQ16625 522 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 DEFB110Q30KQ9 67 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 MFSD4BQ5TF39 518 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 LINC00299Q6ZSB3 139 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 ARHGAP22Q7Z5H3 698 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 SLC15A4Q8N697 577 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 GNPDA2Q8TDQ7 276 aa9.94□□□□□ -0.82
PKP4-206ENST00000452162 DOK4Q8TEW6 326 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms