RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 NKIRAS1Q9NYS0 192 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 ZNF629Q9UEG4 869 aaPredicted RBP12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 ZNF337Q9Y3M9 751 aa12.73□□□□□ -0.37
RTFDC1-204ENST00000449062 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 A0A1W2PQD3 144 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 OR2M5A3KFT3 312 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 EPHA3P29320 983 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 CLK3P49761 638 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 SUCLG1P53597 346 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 UFM1P61960 85 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 STX5Q13190 355 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 TP53BP2Q13625 1128 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 FBXL19-AS1Q494R0 122 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 KLHL26Q53HC5 615 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 AAGABQ6PD74 315 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 MEX3BQ6ZN04 569 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 SZRD1Q7Z422 152 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 SPATA19Q7Z5L4 167 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 CLEC4FQ8N1N0 589 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 COX18Q8N8Q8 333 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 C9orf106Q8NAJ2 232 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 RELL2Q8NC24 303 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 GOT1L1Q8NHS2 421 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 MIPOL1Q8TD10 442 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 C14orf79Q96F83 325 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 DOCK7Q96N67 2140 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 SFXN2Q96NB2 322 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 TRIB1Q96RU8 372 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 SH3GL2Q99962 352 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 TBL1XR1Q9BZK7 514 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 AIG1Q9NVV5 245 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 JKAMPQ9P055 326 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 CLCF1Q9UBD9 225 aa12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 RPH3AQ9Y2J0 694 aaPredicted RBP12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 TEP1Q99973 2627 aaKnown RBP12.72□□□□□ -0.37
RTFDC1-204ENST00000449062 MPDZO75970 2070 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 GOLGA8QA0A0J9YX86 632 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 GOLGA8OA6NCC3 632 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 GOLGA8NF8WBI6 632 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 SLCO1B7G3V0H7 640 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 LINC01387J3KSC0 135 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 HCRTR2O43614 444 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 NDUFB5O43674 189 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 RCBTB2O95199 551 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 C1QCP02747 245 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 H2AFXP16104 143 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 HK1P19367 917 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 PSMA4P25789 261 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 GCKP35557 465 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 SRYQ05066 204 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 GANABQ14697 944 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 CD226Q15762 336 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 TTMPQ5BVD1 217 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 SPANXN4Q5MJ08 99 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 ANXA8L1Q5VT79 327 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 ARSKQ6UWY0 536 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 PLXDC2Q6UX71 529 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 CHDHQ8NE62 594 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 OR5AK3PQ8NH89 298 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 ACTRT2Q8TDY3 377 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 ADAMTS15Q8TE58 950 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 WNT2BQ93097 391 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 DTNBP1Q96EV8 351 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 CCDC115Q96NT0 180 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 OR7D2Q96RA2 312 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 SDF2Q99470 211 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 NPAS1Q99742 590 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 PTGES2Q9H7Z7 377 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 MARCOQ9UEW3 520 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 KCNE5Q9UJ90 142 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 DKKL1Q9UK85 242 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 FAF1Q9UNN5 650 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 CSMD2Q7Z408 3487 aa12.71□□□□□ -0.37
RTFDC1-204ENST00000449062 MED12LQ86YW9 2145 aa12.71□□□□□ -0.38
RTFDC1-204ENST00000449062 TRPC5OSA6NMA1 111 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 CLCA1A8K7I4 914 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 H0YC42 278 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 CFLARO15519 480 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 OIP5O43482 229 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 TGM6O95932 706 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 IL18BPO95998 194 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 IL2RAP01589 272 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 KRT16P08779 473 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 PEPDP12955 493 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 TCEA1P23193 301 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 CTSSP25774 331 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 DGKQP52824 942 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 CLNS1AP54105 237 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 TPD52P55327 224 aaPredicted RBP12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 KRTAP10-9P60411 292 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 RPS26P62854 115 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 FOXF2Q12947 444 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 DPY19L1Q2PZI1 675 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 SPDYE7PQ495Y7 208 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 SLC9B1Q4ZJI4 515 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 DCST2Q5T1A1 773 aa12.7□□□□□ -0.38
RTFDC1-204ENST00000449062 HEPHL1Q6MZM0 1159 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms