RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NUDT13Q86X67 352 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SAMD14Q8IZD0 417 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 OR52I1Q8NGK6 324 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 IGSF8Q969P0 613 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SLC25A18Q9H1K4 315 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 POFUT1Q9H488 388 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 HMX1Q9NP08 348 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 MKKSQ9NPJ1 570 aaPredicted RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 A0A0D9SEW6 157 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 LIPIQ6XZB0 460 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SLC29A4Q7RTT9 530 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 NSMAFQ92636 917 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 MAS1P04201 325 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 GAAP10253 952 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ANXA7P20073 488 aaKnown RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 HOXC5Q00444 222 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 MEF2DQ14814 521 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SF1Q15637 639 aaKnown RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.44□□□□□ -1.227e-7■■■□□ 16
SMG1-202ENST00000446231 FNDC3BQ53EP0 1204 aaKnown RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 TMEM200AQ86VY9 491 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 PNLDC1Q8NA58 520 aaKnown RBP7.44□□□□□ -1.22
SMG1-202ENST00000446231 OR14K1Q8NGZ2 314 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 CD200R1Q8TD46 325 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 RLIMQ9NVW2 624 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 ATG4BQ9Y4P1 393 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 STATHP02808 62 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 SMPD1P17405 629 aa7.44□□□□□ -1.22
SMG1-202ENST00000446231 TMEM129A0AVI4 362 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 MTX2O75431 263 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 MPIP34949 423 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 TAS2R31P59538 309 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 FAM189A2Q15884 450 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 GPRIN1Q7Z2K8 1008 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 NRROSQ86YC3 692 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 OR56A3Q8NH54 315 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 DDX31Q9H8H2 851 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 SOWAHBA6NEL2 793 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SCAMP1O15126 338 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 AHSA1O95433 338 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 CLUP10909 449 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ZMAT1Q5H9K5 638 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SULT4A1Q9BR01 284 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 HOXB1P14653 301 aaPredicted RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 GRPRP30550 384 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 B3GNT9Q6UX72 402 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 GGT3PA6NGU5 568 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SLC22A31A6NKX4 558 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SGK494L7N484 410 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SLC34A2O95436 690 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 RD3LP0DJH9 198 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 XKR7Q5GH72 579 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ZNF354BQ96LW1 612 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 VNN3Q9NY84 501 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ABRACLQ9P1F3 81 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 MYEF2Q9P2K5 600 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 LAMP5Q9UJQ1 280 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 TARM1B6A8C7 271 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SCGB1D2O95969 90 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ELFN1P0C7U0 828 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 UBE2KP61086 200 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ARFRP1Q13795 201 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 PAQR6Q6TCH4 344 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 PXYLP1Q8TE99 480 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 KATNB1Q9BVA0 655 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 C20orf85Q9H1P6 137 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ZFP57Q9NU63 452 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 FAM227AF5H4B4 570 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 TNFRSF10BO14763 440 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 LRG1P02750 347 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 IGFBP1P08833 259 aaPredicted RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 TAS2R19P59542 299 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 OR2B8PP59922 312 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ACTA2P62736 377 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ACTG2P63267 376 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ZNF551Q7Z340 670 aaPredicted RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 CTU1Q7Z7A3 348 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 GPR4P46093 362 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 PREPP48147 710 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 MRPL19P49406 292 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 DGCR2P98153 550 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 CYCSP99999 105 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 GNMTQ14749 295 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 TMPRSS5Q9H3S3 457 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ABHD16BQ9H3Z7 469 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 LUZP4Q9P127 313 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ARFGEF3Q5TH69 2177 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 KIDINS220Q9ULH0 1771 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 CCL15-CCL14A0A0B4J2E2 113 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 DCNP07585 359 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 MTNR1BP49286 362 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 CCL15Q16663 113 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 GXYLT1Q4G148 440 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 OR10Z1Q8NGY1 313 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ZBTB8AQ96BR9 441 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 ATF6BQ99941 703 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 SLC9B1P1A6NJY1 282 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 EPHX1P07099 455 aa7.43□□□□□ -1.22
SMG1-202ENST00000446231 DBIP07108 87 aaKnown RBP7.43□□□□□ -1.22
SMG1-202ENST00000446231 AKAIN1P0CW23 69 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms