RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 ACSS1Q9NUB1 689 aaPredicted RBP13.27□□□□□ -0.28
ERCC3-203ENST00000445889 C20orf141Q9NUB4 165 aa13.27□□□□□ -0.28
ERCC3-203ENST00000445889 MRPS18AQ9NVS2 196 aaKnown RBP13.27□□□□□ -0.28
ERCC3-203ENST00000445889 ATG2BQ96BY7 2078 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 TSPAN11A1L157 253 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 I3L521 148 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 ZNF250P15622 560 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 GIFP27352 417 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 ST3GAL3Q11203 375 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 GPR68Q15743 365 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 KIAA1211LQ6NV74 962 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 LYPD4Q6UWN0 246 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 RASSF6Q6ZTQ3 369 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 CXXC5Q7LFL8 322 aaKnown RBP13.27□□□□□ -0.29
ERCC3-203ENST00000445889 GDF7Q7Z4P5 450 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 SPRED2Q7Z698 418 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 NRSN1Q8IZ57 195 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 OR51L1Q8NGJ5 315 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 PIGKQ92643 395 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 DPCDQ9BVM2 203 aaPredicted RBP13.27□□□□□ -0.29
ERCC3-203ENST00000445889 EPHX3Q9H6B9 360 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 ADAM30Q9UKF2 790 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 ING4Q9UNL4 249 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 NOTCH4Q99466 2003 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 DENND4CQ5VZ89 1909 aa13.27□□□□□ -0.29
ERCC3-203ENST00000445889 J3QLW9 94 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 PLXNA2O75051 1894 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 DNAJB6O75190 326 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 CSF2RAP15509 400 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ZNF19P17023 458 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 PAICSP22234 425 aaKnown RBP13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ITGB8P26012 769 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 SOX9P48436 509 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ZSWIM7Q19AV6 140 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 PGGHGQ32M88 737 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 CEACAM19Q7Z692 300 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ZNF680Q8NEM1 530 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 POF1BQ8WVV4 589 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 RFKQ969G6 155 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 MENTQ9BUN1 341 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 UBQLN3Q9H347 655 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 OBSL1O75147 1896 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 TRBV23OR9-2A0A075B6M9 112 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 PCDH8O95206 1070 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ZGLP1P0C6A0 271 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 NOS3P29474 1203 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 PER3P56645 1201 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 KRT33BQ14525 404 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 MLF2Q15773 248 aaPredicted RBP13.26□□□□□ -0.29
ERCC3-203ENST00000445889 TEX261Q6UWH6 196 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 TMEFF1Q8IYR6 380 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 FBXL6Q8N531 539 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 HMGB4Q8WW32 186 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 SLC41A3Q96GZ6 507 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 INSM2Q96T92 566 aaPredicted RBP13.26□□□□□ -0.29
ERCC3-203ENST00000445889 TIMP4Q99727 224 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 DHRS9Q9BPW9 319 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 SPATA5L1Q9BVQ7 753 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 BTBD1Q9H0C5 482 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ZBP1Q9H171 429 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 MBNL1Q9NR56 388 aaKnown RBP13.26□□□□□ -0.29
ERCC3-203ENST00000445889 GLTPQ9NZD2 209 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 NFKBIL1Q9UBC1 381 aaPredicted RBP13.26□□□□□ -0.29
ERCC3-203ENST00000445889 U3KQ87 197 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 COL4A3Q01955 1670 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 A0A1W2PRG6 482 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 DAPL1A0PJW8 107 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 IRGMA1A4Y4 181 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 CHST10O43529 356 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 EFCAB14O75071 495 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 SLC22A5O76082 557 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 LAG3P18627 525 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 HOXD10P28358 340 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 REEP5Q00765 189 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 PLA1AQ53H76 456 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 BICRALQ6AI39 1079 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 FAM111BQ6SJ93 734 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 RFLNBQ8N5W9 214 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 KCT2Q8NC54 265 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 OR51A7Q8NH64 312 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 CDS1Q92903 461 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 SLC35A4Q96G79 324 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ZFP64Q9NPA5 681 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ISYNA1Q9NPH2 558 aa13.26□□□□□ -0.29
ERCC3-203ENST00000445889 ALPK2Q86TB3 2170 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 SLC9B1P1A6NJY1 282 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 SLC19A2O60779 497 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 PAK4O96013 591 aaPredicted RBP13.25□□□□□ -0.29
ERCC3-203ENST00000445889 DHFRP00374 187 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 SLC35G4P0C7Q5 338 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 SNRPBP14678 240 aaKnown RBP13.25□□□□□ -0.29
ERCC3-203ENST00000445889 BTCP35070 178 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 OR12D2P58182 307 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 RPA4Q13156 261 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 ZNF77Q15935 545 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 WDR88Q6ZMY6 472 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 ARL14Q8N4G2 192 aa13.25□□□□□ -0.29
ERCC3-203ENST00000445889 OR2T33Q8NG76 320 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms