RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 POLHQ9Y253 713 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 A8MVJ9 347 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 ARHGAP33O14559 1287 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 SDC3O75056 442 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 HMGN3Q15651 99 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 NXPE4Q6UWF7 544 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 KIAA1143Q96AT1 154 aaPredicted RBP17.59■□□□□ 0.41
SHANK3-203ENST00000445220 PCDHA9Q9Y5H5 950 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 A6NIN4 97 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 PRSS44E7EML9 344 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 FADS1O60427 444 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 DDCP20711 480 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 FAM122BQ7Z309 247 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 GRASPQ7Z6J2 395 aaPredicted RBP17.59■□□□□ 0.41
SHANK3-203ENST00000445220 CCDC71LQ8N9Z2 235 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 TMEM234Q8WY98 164 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 TCEAL2Q9H3H9 227 aaPredicted RBP17.59■□□□□ 0.41
SHANK3-203ENST00000445220 KCNS2Q9ULS6 477 aa17.59■□□□□ 0.41
SHANK3-203ENST00000445220 KNG1P01042 644 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 ZNF805Q5CZA5 627 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 LDLRAD1Q5T700 205 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 C1orf94Q6P1W5 598 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 SERPINA12Q8IW75 414 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 ARHGAP12Q8IWW6 846 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 GPR148Q8TDV2 347 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 C11orf54Q9H0W9 315 aaPredicted RBP17.58■□□□□ 0.41
SHANK3-203ENST00000445220 LUZP4Q9P127 313 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 METTL15A6NJ78 407 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 A6NL46 340 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 LALBAP00709 142 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 CTHP32929 405 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 CTSOP43234 321 aaPredicted RBP17.58■□□□□ 0.41
SHANK3-203ENST00000445220 TGM4P49221 684 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 MAP4K2Q12851 820 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 LEG1Q6P5S2 330 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 FNDC9Q8TBE3 224 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 HMGB4Q8WW32 186 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 SYT11Q9BT88 431 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 CNIH4Q9P003 139 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 CSNK1G3Q9Y6M4 447 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 RNF215Q9Y6U7 377 aa17.58■□□□□ 0.41
SHANK3-203ENST00000445220 EIF3FO00303 357 aaPredicted RBP17.58■□□□□ 0.4
SHANK3-203ENST00000445220 HRH2P25021 359 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 FCN2Q15485 313 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 TSSK4Q6SA08 328 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 B3GNT9Q6UX72 402 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 COMMD6Q7Z4G1 85 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 SLC9B2Q86UD5 537 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF679Q8IYX0 411 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 NRSN1Q8IZ57 195 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 NPWQ8N729 165 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 ZSCAN4Q8NAM6 433 aaPredicted RBP17.58■□□□□ 0.4
SHANK3-203ENST00000445220 STEAP2Q8NFT2 490 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 C3orf30Q96M34 536 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 DZANK1Q9NVP4 752 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 GGT3PA6NGU5 568 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 BMP1P13497 986 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 M6PRP20645 277 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 LYPD4Q6UWN0 246 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 APOOLQ6UXV4 268 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 IGSF8Q969P0 613 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 MTHFD2LQ9H903 347 aaPredicted RBP17.58■□□□□ 0.4
SHANK3-203ENST00000445220 KCNK6Q9Y257 313 aa17.58■□□□□ 0.4
SHANK3-203ENST00000445220 M0R3H8 397 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 P2RX6O15547 441 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 GJB5O95377 273 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 PSMB1P20618 241 aaKnown RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 HOXA11P31270 313 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF91Q05481 1191 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 IRF4Q15306 451 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 AWAT2Q6E213 333 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 METTL2BQ6P1Q9 378 aaKnown RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 LILRB2Q8N423 598 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 SLC35B4Q969S0 331 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 C20orf27Q9GZN8 174 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 BABAM2Q9NXR7 383 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 TMEM98Q9Y2Y6 226 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 V9GY05 133 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 TSPAN11A1L157 253 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 C2orf78A6NCI8 922 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 RNASET2O00584 256 aaKnown RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 HNRNPA1P09651 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 CD68P34810 354 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF41P51814 821 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 UBXN2BQ14CS0 331 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 DUSP6Q16828 381 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 RAB6CQ53S08 254 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 SYT6Q5T7P8 510 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF551Q7Z340 670 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 PDZD3Q86UT5 571 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 PGAP3Q96FM1 320 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 PGAM5Q96HS1 289 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 UHRF1Q96T88 793 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 RAB6CQ9H0N0 254 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ICKQ9UPZ9 632 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 PCYT1BQ9Y5K3 369 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 hCG_1807616A0A1W2PRN6 198 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 SRPX2O60687 465 aaPredicted RBP17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ERVFC1P60507 584 aa17.57■□□□□ 0.4
SHANK3-203ENST00000445220 ZNF789Q5FWF6 425 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms