RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 CLECL1Q8IZS7 167 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 CLEC4FQ8N1N0 589 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 ANKRD42Q8N9B4 389 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 CDRT4Q8N9R6 151 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 OR5AK3PQ8NH89 298 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 PSMA8Q8TAA3 256 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 FIG4Q92562 907 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 ZNF524Q96C55 264 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 TUBGCP3Q96CW5 907 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 COQ8BQ96D53 544 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 ZNF845Q96IR2 970 aaPredicted RBP9.81□□□□□ -0.84
SF3A1-203ENST00000444440 SERHL2Q9H4I8 314 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 ZCCHC3Q9NUD5 404 aaKnown RBP9.81□□□□□ -0.84
SF3A1-203ENST00000444440 GPATCH2Q9NW75 528 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 RAP2CQ9Y3L5 183 aa9.81□□□□□ -0.84
SF3A1-203ENST00000444440 A0A1W2PRB8 838 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 TMEM120BA0PK00 339 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 ALG1L2C9J202 215 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 SEC14L5O43304 696 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 KCNH1O95259 989 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 IL18BPO95998 194 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 CAPN3P20807 821 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 TBXA2RP21731 343 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 KIR2DL3P43628 341 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 RPL14P50914 215 aaKnown RBP9.8□□□□□ -0.84
SF3A1-203ENST00000444440 MAGOHP61326 146 aaKnown RBP9.8□□□□□ -0.84
SF3A1-203ENST00000444440 HBA1P69905 142 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 PHC1P78364 1004 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 GANABQ14697 944 aaKnown RBP9.8□□□□□ -0.84
SF3A1-203ENST00000444440 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.8□□□□□ -0.84
SF3A1-203ENST00000444440 FLYWCH1Q4VC44 716 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 OR4F3Q6IEY1 312 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 VWA1Q6PCB0 445 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 AAGABQ6PD74 315 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 OLIG3Q7RTU3 272 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 HDXQ7Z353 690 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 GGNQ86UU5 652 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 GOLGA6L1Q8N7Z2 621 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 CEP70Q8NHQ1 597 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 LINC01560Q8TB33 94 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 SMPDL3BQ92485 455 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 JADE3Q92613 823 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 WNT2BQ93097 391 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 PRPF18Q99633 342 aaKnown RBP9.8□□□□□ -0.84
SF3A1-203ENST00000444440 TBL1XR1Q9BZK7 514 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 AKTIPQ9H8T0 292 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 C3orf14Q9HBI5 128 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 PNPOQ9NVS9 261 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 GIN1Q9NXP7 522 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 GALNT8Q9NY28 637 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 EIF3LQ9Y262 564 aaKnown RBP9.8□□□□□ -0.84
SF3A1-203ENST00000444440 VDAC3Q9Y277 283 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 SNX8Q9Y5X2 465 aa9.8□□□□□ -0.84
SF3A1-203ENST00000444440 A0A1W2PNV4 684 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 A0A1W2PPR1 153 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 TTC36A6NLP5 189 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 ANKRD28O15084 1053 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 SCN2BO60939 215 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 OPN1LWP04000 364 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 NGFRP08138 427 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 ALOX5P09917 674 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 PEPDP12955 493 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 IL11P20809 199 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 PSMA4P25789 261 aaKnown RBP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 OPRM1P35372 400 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 GCKP35557 465 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 CCT3P49368 545 aaKnown RBP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 PSMD4P55036 377 aaKnown RBP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 WDR4P57081 412 aaKnown RBP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 C21orf58P58505 322 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 RPS26P62854 115 aaKnown RBP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 EMX2Q04743 252 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 C17orf67Q0P5P2 114 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 TP53BP2Q13625 1128 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 SF3B4Q15427 424 aaKnown RBP eCLIP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 BCL2A1Q16548 175 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 SMU1Q2TAY7 513 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 NDUFAF6Q330K2 333 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 VPS26BQ4G0F5 336 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 CPTPQ5TA50 214 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 AGBL2Q5U5Z8 902 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 ATG16L1Q676U5 607 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 CDC73Q6P1J9 531 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 CAMKMTQ7Z624 323 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 GRAMD2AQ8IUY3 354 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 NATD1Q8N6N6 113 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 COX18Q8N8Q8 333 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 OR5D16Q8NGK9 328 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 FNDC9Q8TBE3 224 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 POC1BQ8TC44 478 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 OR5P2Q8WZ92 322 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 TLCD1Q96CP7 247 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 ARSGQ96EG1 525 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 SH3YL1Q96HL8 342 aaPredicted RBP9.79□□□□□ -0.84
SF3A1-203ENST00000444440 TM9SF2Q99805 663 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 DUSP26Q9BV47 211 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 BTBD2Q9BX70 525 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 PINK1Q9BXM7 581 aa9.79□□□□□ -0.84
SF3A1-203ENST00000444440 PIGUQ9H490 435 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms