RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 UPK1AO00322 258 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 TNFSF11O14788 317 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 RAMP1O60894 148 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 SLITRK5O94991 958 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 IGKV1D-16P01601 117 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 OPN1LWP04000 364 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 RBP1P09455 135 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 CHN1P15882 459 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 TYK2P29597 1187 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 MAGEA4P43358 317 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 MAGEA12P43365 314 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 IRX1P78414 480 aaPredicted RBP12.78□□□□□ -0.36
HMGN1-208ENST00000443046 HEPACAMQ14CZ8 416 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 P2RY6Q15077 328 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 SH2D4BQ5SQS7 431 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 C11orf71Q6IPW1 123 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 GALNT18Q6P9A2 607 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 NUFIP2Q7Z417 695 aaKnown RBP12.78□□□□□ -0.36
HMGN1-208ENST00000443046 C16orf78Q8WTQ4 265 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 ZBTB8AQ96BR9 441 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 TBL1XR1Q9BZK7 514 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 ALG2Q9H553 416 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 Q9N2J8 555 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 GIMAP4Q9NUV9 329 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 SENP1Q9P0U3 644 aa12.78□□□□□ -0.36
HMGN1-208ENST00000443046 MRTO4Q9UKD2 239 aaKnown RBP12.78□□□□□ -0.36
HMGN1-208ENST00000443046 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 ZNF814B7Z6K7 855 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 ALG1L2C9J202 215 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 HAX1O00165 279 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 MANBAO00462 879 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 PCDH7O60245 1069 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 NTN1O95631 604 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 ADAP00813 363 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 NGFRP08138 427 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 IL32P24001 234 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 MAP3K8P41279 467 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 SERPINB8P50452 374 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 PSMD4P55036 377 aaKnown RBP12.77□□□□□ -0.37
HMGN1-208ENST00000443046 CASP9P55211 416 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 CDH13P55290 713 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 ITGADQ13349 1161 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 ZNF239Q16600 458 aaKnown RBP12.77□□□□□ -0.37
HMGN1-208ENST00000443046 PLPPR5Q32ZL2 321 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 GRAMD1BQ3KR37 738 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 TCHHL1Q5QJ38 904 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-208ENST00000443046 HBMQ6B0K9 141 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 TUSC5Q8IXB3 177 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 ZNF619Q8N2I2 560 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 TMEM151AQ8N4L1 468 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 POC1BQ8TC44 478 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 ACTRT2Q8TDY3 377 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 ABHD3Q8WU67 409 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 HOXB13Q92826 284 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-208ENST00000443046 OSTF1Q92882 214 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 KISS1RQ969F8 398 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-208ENST00000443046 VPS11Q9H270 941 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 GP6Q9HCN6 339 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 FAIMQ9NVQ4 179 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 SIRT5Q9NXA8 310 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 TAS2R7Q9NYW3 318 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 KLHL13Q9P2N7 655 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 DMGDHQ9UI17 866 aaKnown RBP12.77□□□□□ -0.37
HMGN1-208ENST00000443046 SAR1BQ9Y6B6 198 aa12.77□□□□□ -0.37
HMGN1-208ENST00000443046 A0A1W2PRB8 838 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 ZSCAN12O43309 604 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 GMFGO60234 142 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 SMIM24O75264 130 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 OR4F21O95013 312 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 IFI6P09912 130 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 SBK3P0C264 359 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 PABPC4LP0CB38 370 aaKnown RBP12.76□□□□□ -0.37
HMGN1-208ENST00000443046 IGHV4-31P0DP07 118 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 SLC25A16P16260 332 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 TSPAN8P19075 237 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 DDCP20711 480 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 HSD17B3P37058 310 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 GSTM5P46439 218 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 NUDT6P53370 316 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 CARD18P57730 90 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 C21orf58P58505 322 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
HMGN1-208ENST00000443046 RNPS1Q15287 305 aaKnown RBP12.76□□□□□ -0.37
HMGN1-208ENST00000443046 TMEM201Q5SNT2 666 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 PDSS1Q5T2R2 415 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 TMEM107Q6UX40 140 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 TRABD2AQ86V40 505 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 TDRPQ86YL5 185 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 ARIH2OSQ8N7S6 290 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.76□□□□□ -0.37
HMGN1-208ENST00000443046 FBXO25Q8TCJ0 367 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 ELP4Q96EB1 424 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 APIPQ96GX9 242 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 RNF145Q96MT1 663 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 BBS4Q96RK4 519 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 KLHDC3Q9BQ90 382 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 ACPTQ9BZG2 426 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 SHARPINQ9H0F6 387 aa12.76□□□□□ -0.37
HMGN1-208ENST00000443046 HHATLQ9HCP6 504 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms