RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 KIAA0040Q15053 153 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 SF3B4Q15427 424 aaKnown RBP eCLIP7.99□□□□□ -1.13
USP6NL-203ENST00000443016 DPY19L1Q2PZI1 675 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 ZNF628Q5EBL2 1059 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 FAM91A1Q658Y4 838 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 SLC30A6Q6NXT4 461 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 R3HCC1LQ7Z5L2 792 aaKnown RBP7.99□□□□□ -1.13
USP6NL-203ENST00000443016 CMIPQ8IY22 773 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 PM20D2Q8IYS1 436 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 ULK2Q8IYT8 1036 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 ZNF675Q8TD23 568 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 TMBIM1Q969X1 311 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 PRPF18Q99633 342 aaKnown RBP7.99□□□□□ -1.13
USP6NL-203ENST00000443016 TIMP4Q99727 224 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 MYLK2Q9H1R3 596 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 UBQLN3Q9H347 655 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 MYNNQ9NPC7 610 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 Q9UFV3 132 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 SLC6A5Q9Y345 797 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 GPR45Q9Y5Y3 372 aa7.99□□□□□ -1.13
USP6NL-203ENST00000443016 AHRRA9YTQ3 701 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 NME6O75414 186 aaPredicted RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 SLC22A3O75751 556 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 HPNP05981 417 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 PRPS1L1P21108 318 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 BMP5P22003 454 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 MSX1P28360 303 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 ADH7P40394 386 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 CORO7P57737 925 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 MYBPHQ13203 477 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 SNTA1Q13424 505 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 WIPI1Q5MNZ9 446 aaPredicted RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 FNDC7Q5VTL7 733 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 OR14L1PQ8NHC6 308 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 CMTM5Q96DZ9 223 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 TMEM41AQ96HV5 264 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 COL21A1Q96P44 957 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 TSSK3Q96PN8 268 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 NODALQ96S42 347 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 ZNF385DQ9H6B1 395 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 SERHLQ9NQF3 203 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 ITGB1BP2Q9UKP3 347 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 GPR55Q9Y2T6 319 aaPredicted RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 MED12Q93074 2177 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 F8P00451 2351 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 FREM3P0C091 2139 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 MTORP42345 2549 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 PHF3Q92576 2039 aaKnown RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 PRAMEF25A6NGN4 478 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 OR6C70A6NIJ9 312 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 CCT8L1PA6NM43 557 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 DVL2O14641 736 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 CBR3O75828 277 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 IL2RAP01589 272 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 PRDX6P30041 224 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 NTSP30990 170 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 CLDN8P56748 225 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 ZNF155Q12901 538 aaPredicted RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 KLF10Q13118 480 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 PTGR1Q14914 329 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 AGKQ53H12 422 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 EIPR1Q53HC9 387 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 YRDCQ86U90 279 aaKnown RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 SLC44A2Q8IWA5 706 aaPredicted RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 FAM156AQ8NDB6 213 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 ABTB1Q969K4 478 aaPredicted RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 C11orf24Q96F05 449 aaPredicted RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 C14orf79Q96F83 325 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 BTBD9Q96Q07 612 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 NUDT16L1Q9BRJ7 211 aaKnown RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 MCCC2Q9HCC0 563 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 ATAD3AQ9NVI7 634 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 DDX18Q9NVP1 670 aaKnown RBP7.98□□□□□ -1.13
USP6NL-203ENST00000443016 ARMCX1Q9P291 453 aa7.98□□□□□ -1.13
USP6NL-203ENST00000443016 FAM234BA2RU67 622 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 HSPB2A8KAH6 182 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 TO15178 435 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 COQ9O75208 318 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 CNOT4O95628 575 aaKnown RBP7.97□□□□□ -1.13
USP6NL-203ENST00000443016 CT45A8P0DMV1 189 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 CT45A9P0DMV2 189 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 PTPN6P29350 595 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 SOX18P35713 384 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 MC3RP41968 323 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 RFX3P48380 749 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 MNAT1P51948 309 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 NME5P56597 212 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 PSPHP78330 225 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 TFF3Q07654 80 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 CRYZQ08257 329 aaKnown RBP7.97□□□□□ -1.13
USP6NL-203ENST00000443016 RCAN2Q14206 197 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 HSPB2Q16082 182 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 SLC25A35Q3KQZ1 300 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 CT45A2Q5DJT8 189 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 RIPPLY2Q5TAB7 128 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 VASNQ6EMK4 673 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 OR5M10Q6IEU7 315 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 TMEM107Q6UX40 140 aa7.97□□□□□ -1.13
USP6NL-203ENST00000443016 CCDC121Q6ZUS5 278 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms